Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.39□□□□□ -0.11
SSR1P43307 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.39□□□□□ -0.11
SSR1P43307 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.39□□□□□ -0.11
SSR1P43307 EEF1DP2-201ENST00000433698 843 ntBASIC14.39□□□□□ -0.11
SSR1P43307 GRPEL2P1-201ENST00000453145 339 ntBASIC14.39□□□□□ -0.11
SSR1P43307 REEP1-202ENST00000453231 940 ntTSL 2 BASIC14.39□□□□□ -0.11
SSR1P43307 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
SSR1P43307 ACTG1P17-201ENST00000558391 1119 ntBASIC14.39□□□□□ -0.11
SSR1P43307 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.39□□□□□ -0.11
SSR1P43307 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.39□□□□□ -0.11
SSR1P43307 AC244093.1-201ENST00000610837 814 ntBASIC14.39□□□□□ -0.11
SSR1P43307 AP001505.2-201ENST00000616815 443 ntBASIC14.39□□□□□ -0.11
SSR1P43307 AC007718.1-201ENST00000621078 280 ntBASIC14.39□□□□□ -0.11
SSR1P43307 FANCC-202ENST00000375305 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 PER1-211ENST00000581082 4521 ntTSL 5 BASIC14.39□□□□□ -0.11
SSR1P43307 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SSR1P43307 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SSR1P43307 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SSR1P43307 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 AC022497.1-201ENST00000624916 3691 ntBASIC14.39□□□□□ -0.11
SSR1P43307 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 AC022400.8-201ENST00000623453 3599 ntBASIC14.39□□□□□ -0.11
SSR1P43307 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SSR1P43307 CEP170-203ENST00000366543 6727 ntTSL 5 BASIC14.39□□□□□ -0.11
SSR1P43307 OR8J1-202ENST00000533152 1320 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
SSR1P43307 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SSR1P43307 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC14.38□□□□□ -0.11
SSR1P43307 AGPAT1-203ENST00000375107 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC14.38□□□□□ -0.11
SSR1P43307 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.38□□□□□ -0.11
SSR1P43307 AC020907.1-201ENST00000616460 1350 ntBASIC14.38□□□□□ -0.11
SSR1P43307 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 DRC7-202ENST00000360716 3041 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SSR1P43307 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC14.38□□□□□ -0.11
SSR1P43307 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.38□□□□□ -0.11
SSR1P43307 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SSR1P43307 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.38□□□□□ -0.11
SSR1P43307 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC14.38□□□□□ -0.11
SSR1P43307 AC007274.1-201ENST00000439805 662 ntBASIC14.38□□□□□ -0.11
SSR1P43307 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC14.38□□□□□ -0.11
SSR1P43307 SCARNA12-201ENST00000459155 270 ntBASIC14.38□□□□□ -0.11
SSR1P43307 RN7SL67P-201ENST00000492147 296 ntBASIC14.38□□□□□ -0.11
SSR1P43307 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.38□□□□□ -0.11
SSR1P43307 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.38□□□□□ -0.11
SSR1P43307 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.38□□□□□ -0.11
SSR1P43307 AL606760.3-201ENST00000569869 3591 ntBASIC14.38□□□□□ -0.11
SSR1P43307 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SSR1P43307 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.38□□□□□ -0.11
SSR1P43307 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SSR1P43307 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
SSR1P43307 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SSR1P43307 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SSR1P43307 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.38□□□□□ -0.11
SSR1P43307 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC14.38□□□□□ -0.11
SSR1P43307 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SSR1P43307 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC14.38□□□□□ -0.11
SSR1P43307 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC14.38□□□□□ -0.11
SSR1P43307 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC14.37□□□□□ -0.11
SSR1P43307 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
SSR1P43307 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 GDA-203ENST00000376986 1771 ntTSL 2 BASIC14.37□□□□□ -0.11
SSR1P43307 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC14.37□□□□□ -0.11
SSR1P43307 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 AC027369.3-201ENST00000530465 3707 ntBASIC14.37□□□□□ -0.11
SSR1P43307 USP5-201ENST00000229268 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SSR1P43307 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.37□□□□□ -0.11
SSR1P43307 ZC3H10-201ENST00000257940 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms