Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC13.98□□□□□ -0.17
MTHFRP42898 POLR2LP1-206ENST00000444785 187 ntBASIC13.98□□□□□ -0.17
MTHFRP42898 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MTHFRP42898 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC13.98□□□□□ -0.17
MTHFRP42898 AL358215.1-201ENST00000481350 482 ntTSL 5 BASIC13.98□□□□□ -0.17
MTHFRP42898 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MTHFRP42898 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC13.98□□□□□ -0.17
MTHFRP42898 AL450346.2-201ENST00000495602 1024 ntBASIC13.98□□□□□ -0.17
MTHFRP42898 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
MTHFRP42898 AC100858.2-201ENST00000531948 487 ntTSL 3 BASIC13.98□□□□□ -0.17
MTHFRP42898 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC13.98□□□□□ -0.17
MTHFRP42898 C19orf53-202ENST00000588234 873 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MTHFRP42898 AC073254.1-209ENST00000604677 631 ntTSL 5 BASIC13.98□□□□□ -0.17
MTHFRP42898 AP000553.2-201ENST00000609038 441 ntBASIC13.98□□□□□ -0.17
MTHFRP42898 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC13.98□□□□□ -0.17
MTHFRP42898 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
MTHFRP42898 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
MTHFRP42898 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
MTHFRP42898 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.98□□□□□ -0.17
MTHFRP42898 FAM90A12P-201ENST00000519497 2375 ntBASIC13.98□□□□□ -0.17
MTHFRP42898 FAM90A24P-201ENST00000520792 2369 ntBASIC13.98□□□□□ -0.17
MTHFRP42898 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MTHFRP42898 FAM156A-208ENST00000615092 2098 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
MTHFRP42898 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MTHFRP42898 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MTHFRP42898 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
MTHFRP42898 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
MTHFRP42898 CA6-205ENST00000480186 1493 ntTSL 2 BASIC13.98□□□□□ -0.17
MTHFRP42898 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MTHFRP42898 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MTHFRP42898 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC13.98□□□□□ -0.17
MTHFRP42898 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.98□□□□□ -0.17
MTHFRP42898 DMBT1P1-203ENST00000636837 4628 ntBASIC13.98□□□□□ -0.17
MTHFRP42898 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
MTHFRP42898 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.98□□□□□ -0.17
MTHFRP42898 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
MTHFRP42898 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MTHFRP42898 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
MTHFRP42898 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.98□□□□□ -0.17
MTHFRP42898 ATF4P4-201ENST00000393544 1930 ntBASIC13.98□□□□□ -0.17
MTHFRP42898 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
MTHFRP42898 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
MTHFRP42898 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 AL356585.2-201ENST00000625078 2396 ntBASIC13.97□□□□□ -0.17
MTHFRP42898 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
MTHFRP42898 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 AP000437.1-201ENST00000624057 2085 ntBASIC13.97□□□□□ -0.17
MTHFRP42898 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.97□□□□□ -0.17
MTHFRP42898 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC13.97□□□□□ -0.17
MTHFRP42898 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC13.97□□□□□ -0.17
MTHFRP42898 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
MTHFRP42898 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.97□□□□□ -0.17
MTHFRP42898 ZCCHC7-201ENST00000322831 1219 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 SCGB1C1-201ENST00000342878 431 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 NAA10-205ENST00000393712 908 ntTSL 5 BASIC13.97□□□□□ -0.17
MTHFRP42898 KRT8P6-201ENST00000399259 1207 ntBASIC13.97□□□□□ -0.17
MTHFRP42898 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
MTHFRP42898 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC13.97□□□□□ -0.17
MTHFRP42898 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC13.97□□□□□ -0.17
MTHFRP42898 SRP9P1-201ENST00000445874 261 ntBASIC13.97□□□□□ -0.17
MTHFRP42898 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC13.97□□□□□ -0.17
MTHFRP42898 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC13.97□□□□□ -0.17
MTHFRP42898 RN7SL47P-201ENST00000488710 299 ntBASIC13.97□□□□□ -0.17
MTHFRP42898 AC010395.2-201ENST00000509899 904 ntBASIC13.97□□□□□ -0.17
MTHFRP42898 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 C14orf132-201ENST00000553764 562 ntTSL 4 BASIC13.97□□□□□ -0.17
MTHFRP42898 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC13.97□□□□□ -0.17
MTHFRP42898 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC13.97□□□□□ -0.17
MTHFRP42898 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC13.97□□□□□ -0.17
MTHFRP42898 AC022001.3-201ENST00000606330 596 ntBASIC13.97□□□□□ -0.17
MTHFRP42898 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC13.97□□□□□ -0.17
MTHFRP42898 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
MTHFRP42898 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.97□□□□□ -0.17
MTHFRP42898 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
MTHFRP42898 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 PEG13-201ENST00000631594 5667 ntBASIC13.97□□□□□ -0.17
MTHFRP42898 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.97□□□□□ -0.17
MTHFRP42898 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
MTHFRP42898 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.96□□□□□ -0.17
MTHFRP42898 MKRN7P-201ENST00000433469 1371 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms