Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TMUB2-205ENST00000587172 1598 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN1P35523 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 AL359317.2-201ENST00000554898 1826 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN1P35523 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 LRFN3-204ENST00000588831 3689 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLCN1P35523 API5-208ENST00000531273 1868 ntTSL 2 BASIC15.31■□□□□ 0.04
CLCN1P35523 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 SLC10A1-201ENST00000216540 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC15.31■□□□□ 0.04
CLCN1P35523 PMEL-204ENST00000548493 2204 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
CLCN1P35523 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLCN1P35523 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCN1P35523 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 FDXACB1-201ENST00000260257 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 CTLA4-202ENST00000302823 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 TMC2-201ENST00000358864 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.3■□□□□ 0.04
CLCN1P35523 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLCN1P35523 DPM3-202ENST00000368399 517 ntBASIC15.3■□□□□ 0.04
CLCN1P35523 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CLCN1P35523 LRCH1-203ENST00000389798 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CLCN1P35523 KIR2DL4-205ENST00000396284 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 MASP2-201ENST00000400897 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 TFIP11-204ENST00000407690 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 LIMS1-204ENST00000409441 1627 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 AC006144.1-201ENST00000424220 1600 ntBASIC15.3■□□□□ 0.04
CLCN1P35523 BX284668.4-201ENST00000453917 508 ntBASIC15.3■□□□□ 0.04
CLCN1P35523 AC097652.1-201ENST00000511385 2114 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCN1P35523 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCN1P35523 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCN1P35523 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCN1P35523 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCN1P35523 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.3■□□□□ 0.04
CLCN1P35523 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC15.3■□□□□ 0.04
CLCN1P35523 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 MCAM-201ENST00000264036 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 TRIM46-201ENST00000334634 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC15.3■□□□□ 0.04
CLCN1P35523 STAT3-213ENST00000588969 2772 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLCN1P35523 RDH16-202ENST00000398138 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CLCN1P35523 AC007336.3-201ENST00000623886 2160 ntBASIC15.29■□□□□ 0.04
CLCN1P35523 AL132656.4-201ENST00000623504 2122 ntBASIC15.29■□□□□ 0.04
CLCN1P35523 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLCN1P35523 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN1P35523 ARL8B-202ENST00000419534 1684 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN1P35523 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN1P35523 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLCN1P35523 LRRIQ3-203ENST00000370911 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 POLN-201ENST00000382865 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 RAB43-205ENST00000393308 4193 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
CLCN1P35523 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 ATAT1-205ENST00000376483 2646 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CLCN1P35523 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CLCN1P35523 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN1P35523 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 C3orf35-206ENST00000452017 513 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
CLCN1P35523 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.29■□□□□ 0.04
CLCN1P35523 FAM8A2P-201ENST00000528813 1142 ntBASIC15.29■□□□□ 0.04
CLCN1P35523 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN1P35523 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC15.29■□□□□ 0.04
CLCN1P35523 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.29■□□□□ 0.04
CLCN1P35523 AC090164.2-201ENST00000611487 516 ntBASIC15.29■□□□□ 0.04
CLCN1P35523 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 NLRP2-209ENST00000537859 3507 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CLCN1P35523 AL117378.1-201ENST00000454596 2305 ntTSL 2 BASIC15.29■□□□□ 0.04
CLCN1P35523 MAPK10-262ENST00000641051 5738 ntBASIC15.29■□□□□ 0.04
CLCN1P35523 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC15.29■□□□□ 0.04
CLCN1P35523 AC011481.3-201ENST00000623895 5594 ntBASIC15.29■□□□□ 0.04
CLCN1P35523 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLCN1P35523 ZMYM5-201ENST00000337963 3268 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CLCN1P35523 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CLCN1P35523 KCTD10-201ENST00000228495 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 MYT1-202ENST00000360149 2061 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
CLCN1P35523 ZNF135-201ENST00000313434 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 BEST3-201ENST00000266661 1876 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 C3orf35-201ENST00000328376 1859 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLCN1P35523 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms