Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 SNX10-201ENST00000338523 2546 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 PTN-202ENST00000393083 1599 ntTSL 5 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 MCM4-215ENST00000523944 4105 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 MIR658-201ENST00000385210 100 ntBASIC11.55□□□□□ -0.56
NICN1Q9BSH3 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 LINC00265-2P-201ENST00000413372 782 ntBASIC11.55□□□□□ -0.56
NICN1Q9BSH3 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 AC098934.1-203ENST00000442868 1262 ntBASIC11.55□□□□□ -0.56
NICN1Q9BSH3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 GPR53P-205ENST00000457298 1084 ntBASIC11.55□□□□□ -0.56
NICN1Q9BSH3 RN7SL788P-201ENST00000460504 316 ntBASIC11.55□□□□□ -0.56
NICN1Q9BSH3 AC095040.1-201ENST00000513286 675 ntBASIC11.55□□□□□ -0.56
NICN1Q9BSH3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 ABBA01031663.1-201ENST00000635630 790 ntBASIC11.55□□□□□ -0.56
NICN1Q9BSH3 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 BX324167.2-201ENST00000623717 3316 ntBASIC11.55□□□□□ -0.56
NICN1Q9BSH3 HEY2-202ENST00000368365 2461 ntTSL 2 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 NBN-203ENST00000409330 4523 ntTSL 5 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 AP1M1-203ENST00000444449 2311 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 ZBTB26-201ENST00000373654 2047 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 TUBBP5-203ENST00000508529 1334 ntBASIC11.55□□□□□ -0.56
NICN1Q9BSH3 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 SYNJ2-208ENST00000640338 3959 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 DNAI2-201ENST00000311014 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
NICN1Q9BSH3 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 FSTL1-202ENST00000424703 1396 ntTSL 2 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 SHANK2-203ENST00000409161 9208 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 GALT-201ENST00000378842 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 GLYR1-212ENST00000591451 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 MTERF2-207ENST00000552029 3235 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 AC239868.1-201ENST00000369385 493 ntBASIC11.54□□□□□ -0.56
NICN1Q9BSH3 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 SLC16A6P1-201ENST00000413214 1059 ntBASIC11.54□□□□□ -0.56
NICN1Q9BSH3 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 AL353637.1-201ENST00000451571 732 ntBASIC11.54□□□□□ -0.56
NICN1Q9BSH3 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 AC132812.1-201ENST00000583145 892 ntBASIC11.54□□□□□ -0.56
NICN1Q9BSH3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 AC026740.1-201ENST00000607068 791 ntBASIC11.54□□□□□ -0.56
NICN1Q9BSH3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 HPX-213ENST00000615166 826 ntTSL 5 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 AL513497.1-201ENST00000624273 2083 ntBASIC11.54□□□□□ -0.56
NICN1Q9BSH3 TG-201ENST00000220616 8450 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 FMNL1-202ENST00000331495 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 SLC25A13-202ENST00000416240 3192 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
NICN1Q9BSH3 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms