Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 PIN4P1-201ENST00000451079 396 ntBASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AC084752.1-201ENST00000509766 622 ntBASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 CTBP2P4-201ENST00000513884 920 ntBASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AL158211.2-201ENST00000607282 395 ntBASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AC126755.5-201ENST00000622756 267 ntBASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AC137723.2-201ENST00000623540 398 ntBASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 AC091807.1-201ENST00000418838 1544 ntBASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 DLX4-206ENST00000611342 1662 ntBASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LYSMD3Q7Z3D4 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC13.52□□□□□ -0.24
LYSMD3Q7Z3D4 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD3Q7Z3D4 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD3Q7Z3D4 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
LYSMD3Q7Z3D4 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC13.52□□□□□ -0.24
LYSMD3Q7Z3D4 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD3Q7Z3D4 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
LYSMD3Q7Z3D4 ZSCAN32-202ENST00000396846 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD3Q7Z3D4 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LYSMD3Q7Z3D4 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 AP000354.1-201ENST00000396982 456 ntBASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 AL355334.1-201ENST00000417713 215 ntBASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 OLAH-203ENST00000378228 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LYSMD3Q7Z3D4 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LYSMD3Q7Z3D4 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms