Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTF1AQ7RTS3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PTF1AQ7RTS3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTF1AQ7RTS3 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTF1AQ7RTS3 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTF1AQ7RTS3 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC16.66■□□□□ 0.26
PTF1AQ7RTS3 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTF1AQ7RTS3 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PTF1AQ7RTS3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 SLC2A14-205ENST00000535295 1732 ntTSL 2 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 PAGE4-202ENST00000376141 487 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 MRPL36-201ENST00000382647 587 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 TXN2-204ENST00000416967 1280 ntTSL 2 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 P2RX6P-202ENST00000450626 357 ntBASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 CHIA-207ENST00000451398 1256 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 CLDN16-202ENST00000456423 430 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 RN7SL756P-201ENST00000488739 268 ntBASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 AP001453.2-201ENST00000544553 391 ntTSL 2 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 LINC02395-202ENST00000547443 724 ntTSL 3 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 LINC02074-201ENST00000581028 569 ntTSL 4 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 LINC02074-202ENST00000584003 573 ntTSL 4 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 BID-211ENST00000611040 419 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 NOP16-210ENST00000619979 963 ntTSL 5 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 AC109826.1-203ENST00000624259 1105 ntTSL 5 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 AC010976.1-201ENST00000631170 734 ntTSL 5 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 PRSS2-206ENST00000633969 852 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 AL513478.3-201ENST00000641038 1095 ntBASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 LINGO1-AS1-201ENST00000558691 1720 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 AC108024.1-201ENST00000626286 1721 ntBASIC16.65■□□□□ 0.26
PTF1AQ7RTS3 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.64■□□□□ 0.26
PTF1AQ7RTS3 AC106872.1-201ENST00000512492 1360 ntBASIC16.64■□□□□ 0.26
PTF1AQ7RTS3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 LIPC-202ENST00000356113 2161 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 UGT1A1-201ENST00000305208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 AP000925.1-201ENST00000425960 1449 ntBASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 KRT40-201ENST00000377755 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 AC072061.1-201ENST00000569710 2234 ntBASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 RARRES3-202ENST00000354445 696 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 GSTA4-201ENST00000370959 793 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 PRDX1-203ENST00000372079 609 ntTSL 3 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 CLIC1-209ENST00000395892 1197 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 AC003101.1-201ENST00000412403 459 ntTSL 3 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 HUS1-202ENST00000432325 1125 ntTSL 5 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 AL445933.2-201ENST00000440249 265 ntTSL 2 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 LINC00877-202ENST00000464271 552 ntTSL 4 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 RN7SL313P-201ENST00000497618 288 ntBASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 WISP1-204ENST00000517423 716 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 FAM86B1-215ENST00000533513 725 ntTSL 5 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 KRT18P7-201ENST00000557241 1219 ntBASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 AC245748.2-201ENST00000588655 574 ntTSL 4 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 IGF2BP2-203ENST00000421047 1711 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PTF1AQ7RTS3 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTF1AQ7RTS3 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PTF1AQ7RTS3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PTF1AQ7RTS3 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTF1AQ7RTS3 AC068587.6-202ENST00000641839 5619 ntBASIC16.63■□□□□ 0.25
PTF1AQ7RTS3 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC16.63■□□□□ 0.25
PTF1AQ7RTS3 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PTF1AQ7RTS3 ARRB2-207ENST00000571206 1659 ntTSL 5 BASIC16.63■□□□□ 0.25
PTF1AQ7RTS3 VPS26A-203ENST00000395098 2554 ntTSL 5 BASIC16.63■□□□□ 0.25
PTF1AQ7RTS3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.63■□□□□ 0.25
PTF1AQ7RTS3 PPM1K-201ENST00000295908 1940 ntTSL 5 BASIC16.63■□□□□ 0.25
PTF1AQ7RTS3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.63■□□□□ 0.25
PTF1AQ7RTS3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PTF1AQ7RTS3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms