Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TBC1D21-201ENST00000300504 1207 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 AK4P5-201ENST00000404520 634 ntBASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 VN1R64P-201ENST00000424940 933 ntBASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 HLCS-IT1-201ENST00000434195 531 ntTSL 2 BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 U62317.1-201ENST00000434237 157 ntTSL 3 BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 AC074366.1-204ENST00000446277 552 ntTSL 3 BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 PDE4C-213ENST00000598111 1284 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 AC006547.1-206ENST00000600617 878 ntTSL 5 BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 AC079882.1-201ENST00000609433 375 ntBASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 LIN28B-AS1-204ENST00000636951 610 ntTSL 5 BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 GP6-203ENST00000417454 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
VPS13DQ5THJ4 KCNAB1-203ENST00000389636 1806 ntTSL 2 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 AC136604.2-201ENST00000500262 1966 ntTSL 2 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 LIPG-205ENST00000580036 1453 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 FOXN4-202ENST00000355216 2958 ntTSL 2 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 CHRDL2-201ENST00000263671 1712 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 TIRAP-201ENST00000392678 1264 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 ATF4P3-201ENST00000433309 1056 ntBASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 TXNDC9-205ENST00000434323 733 ntTSL 5 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 OR7E33P-201ENST00000437705 966 ntBASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 RN7SL313P-201ENST00000497618 288 ntBASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 AC073578.1-201ENST00000535133 493 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 HIST2H4B-201ENST00000579512 1132 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 AC100830.3-201ENST00000583044 554 ntBASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 AC022392.1-201ENST00000609403 744 ntBASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 LYNX1-205ENST00000620006 868 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 BEND3P2-201ENST00000414425 2254 ntBASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 FAM114A2-211ENST00000520667 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 CT55-202ENST00000344129 1728 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 AC019294.4-201ENST00000561777 2905 ntBASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 ZNF816-201ENST00000270457 582 ntTSL 3 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 MRPL55-212ENST00000366739 641 ntAPPRIS P1 TSL 3 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 AL162464.2-201ENST00000557761 526 ntTSL 4 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 AL357137.1-201ENST00000604645 203 ntBASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 ERGIC3-220ENST00000640748 832 ntTSL 5 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 AL513478.3-201ENST00000641038 1095 ntBASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 ZC3HC1-203ENST00000360708 1676 ntTSL 2 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 RAE1-209ENST00000527947 1503 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 PEX1-204ENST00000438045 3329 ntTSL 2 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 WSB1-202ENST00000348811 1611 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 ENO2-209ENST00000538763 1646 ntTSL 5 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 AL353616.2-201ENST00000413269 1739 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 ZNF669-204ENST00000448299 1718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 FKBP1A-201ENST00000381715 705 ntTSL 2 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 RPL36P20-201ENST00000423702 319 ntBASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 AC005324.2-201ENST00000433051 415 ntTSL 5 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 PRRX2-AS1-201ENST00000440413 429 ntTSL 2 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 AL513283.1-201ENST00000441790 1087 ntTSL 5 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 AL450326.1-201ENST00000442526 760 ntTSL 2 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 AC027281.2-201ENST00000623856 713 ntBASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 MTFR1L-210ENST00000474295 1873 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC8.52□□□□□ -1.05
VPS13DQ5THJ4 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 SLC25A19-204ENST00000416858 1587 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 ALOX5-208ENST00000612635 1945 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 VENTXP1-201ENST00000569334 2716 ntBASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 TCTN3-204ENST00000430368 1778 ntTSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 ZNF805-202ENST00000414468 1884 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 PMS2CL-202ENST00000403974 1529 ntBASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 MRPL27-201ENST00000225969 716 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 GAGE10-201ENST00000407599 538 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 TMX3-202ENST00000443099 913 ntTSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 AC093367.1-201ENST00000517332 420 ntBASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 AC121320.1-201ENST00000580975 839 ntTSL 3 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 AC016590.1-203ENST00000590889 547 ntTSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 MEG8_2.1-201ENST00000610604 122 ntBASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 MIR6749-201ENST00000617008 69 ntBASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 FAM86C2P-205ENST00000531806 1814 ntTSL 2 BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 TSGA13-201ENST00000356588 1372 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
VPS13DQ5THJ4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms