Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 APOL2-203ENST00000451256 1421 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
O00370 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.31□□□□□ -0.12
O00370 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
O00370 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
O00370 TRPM4-202ENST00000427978 3444 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
O00370 ANKDD1A-207ENST00000496660 1477 ntTSL 2 BASIC14.31□□□□□ -0.12
O00370 NCSTN-202ENST00000368063 3031 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
O00370 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC14.31□□□□□ -0.12
O00370 CEP83-208ENST00000547575 3122 ntTSL 2 BASIC14.3□□□□□ -0.12
O00370 INCENP-201ENST00000278849 3698 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
O00370 ZNF621-204ENST00000431278 2613 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC14.3□□□□□ -0.12
O00370 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC14.3□□□□□ -0.12
O00370 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
O00370 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
O00370 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
O00370 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
O00370 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
O00370 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
O00370 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 HNRNPA1P33-201ENST00000421426 561 ntBASIC14.3□□□□□ -0.12
O00370 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC14.3□□□□□ -0.12
O00370 AC022201.1-201ENST00000452525 577 ntTSL 4 BASIC14.3□□□□□ -0.12
O00370 LDHBP1-201ENST00000455730 1119 ntBASIC14.3□□□□□ -0.12
O00370 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC14.3□□□□□ -0.12
O00370 AC008026.2-201ENST00000495438 348 ntBASIC14.3□□□□□ -0.12
O00370 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC14.3□□□□□ -0.12
O00370 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 AC005777.1-201ENST00000588332 187 ntBASIC14.3□□□□□ -0.12
O00370 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
O00370 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 NAMA-206ENST00000605377 509 ntTSL 5 BASIC14.3□□□□□ -0.12
O00370 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC14.3□□□□□ -0.12
O00370 AC138466.5-201ENST00000624002 808 ntBASIC14.3□□□□□ -0.12
O00370 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC14.3□□□□□ -0.12
O00370 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
O00370 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC14.3□□□□□ -0.12
O00370 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 Z97653.2-201ENST00000623057 1418 ntBASIC14.3□□□□□ -0.12
O00370 ATL2-201ENST00000378954 2868 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 TMED7-201ENST00000456936 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 LIMS1-205ENST00000410093 1526 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
O00370 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC14.3□□□□□ -0.12
O00370 AL355336.1-201ENST00000451355 1676 ntTSL 2 BASIC14.3□□□□□ -0.12
O00370 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
O00370 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC14.29□□□□□ -0.12
O00370 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
O00370 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
O00370 CNTNAP2-207ENST00000628930 1944 ntTSL 2 BASIC14.29□□□□□ -0.12
O00370 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC14.29□□□□□ -0.12
O00370 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 AC110048.1-201ENST00000604293 2157 ntBASIC14.29□□□□□ -0.12
O00370 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC14.29□□□□□ -0.12
O00370 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
O00370 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC14.29□□□□□ -0.12
O00370 AP001972.5-201ENST00000624624 2338 ntBASIC14.29□□□□□ -0.12
O00370 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
O00370 RHOC-205ENST00000369636 786 ntTSL 2 BASIC14.29□□□□□ -0.12
O00370 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
O00370 RPS9-202ENST00000391751 510 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC14.29□□□□□ -0.12
O00370 AC012362.1-201ENST00000434906 739 ntBASIC14.29□□□□□ -0.12
O00370 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.29□□□□□ -0.12
O00370 AC026336.4-201ENST00000624565 1050 ntBASIC14.29□□□□□ -0.12
O00370 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC14.29□□□□□ -0.12
O00370 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC14.29□□□□□ -0.12
O00370 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC14.29□□□□□ -0.12
O00370 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
O00370 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms