Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 Z99916.2-201ENST00000604037 246 ntBASIC9.35□□□□□ -0.91
MACF1Q9UPN3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 MIR4758-201ENST00000577688 71 ntBASIC9.35□□□□□ -0.91
MACF1Q9UPN3 AC105233.4-201ENST00000642045 216 ntBASIC9.35□□□□□ -0.91
MACF1Q9UPN3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 APTR-203ENST00000430801 583 ntTSL 5 BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 AC133552.2-202ENST00000575694 574 ntBASIC9.35□□□□□ -0.91
MACF1Q9UPN3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC9.35□□□□□ -0.91
MACF1Q9UPN3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 GPALPP1-207ENST00000611650 899 ntBASIC9.34□□□□□ -0.91
MACF1Q9UPN3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 AL449106.1-201ENST00000608517 1980 ntBASIC9.34□□□□□ -0.91
MACF1Q9UPN3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 AC026366.1-201ENST00000488803 879 ntBASIC9.34□□□□□ -0.91
MACF1Q9UPN3 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
MACF1Q9UPN3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC9.33□□□□□ -0.92
MACF1Q9UPN3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
MACF1Q9UPN3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC9.32□□□□□ -0.92
MACF1Q9UPN3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
MACF1Q9UPN3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
MACF1Q9UPN3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
MACF1Q9UPN3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC9.32□□□□□ -0.92
MACF1Q9UPN3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC9.32□□□□□ -0.92
MACF1Q9UPN3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms