Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.47■□□□□ 0.87
HPF1Q9NWY4 AC233992.3-201ENST00000607491 485 ntBASIC20.47■□□□□ 0.87
HPF1Q9NWY4 CA15P2-201ENST00000611168 834 ntBASIC20.47■□□□□ 0.87
HPF1Q9NWY4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPF1Q9NWY4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
HPF1Q9NWY4 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPF1Q9NWY4 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPF1Q9NWY4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.47■□□□□ 0.87
HPF1Q9NWY4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPF1Q9NWY4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HPF1Q9NWY4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HPF1Q9NWY4 CLDN5-201ENST00000403084 2357 ntBASIC20.46■□□□□ 0.87
HPF1Q9NWY4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPF1Q9NWY4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.46■□□□□ 0.87
HPF1Q9NWY4 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HPF1Q9NWY4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
HPF1Q9NWY4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.46■□□□□ 0.87
HPF1Q9NWY4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPF1Q9NWY4 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPF1Q9NWY4 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.46■□□□□ 0.87
HPF1Q9NWY4 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPF1Q9NWY4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPF1Q9NWY4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPF1Q9NWY4 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HPF1Q9NWY4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HPF1Q9NWY4 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPF1Q9NWY4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
HPF1Q9NWY4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.45■□□□□ 0.86
HPF1Q9NWY4 ZNRF2P3-201ENST00000424200 374 ntBASIC20.45■□□□□ 0.86
HPF1Q9NWY4 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.45■□□□□ 0.86
HPF1Q9NWY4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HPF1Q9NWY4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPF1Q9NWY4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPF1Q9NWY4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
HPF1Q9NWY4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPF1Q9NWY4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPF1Q9NWY4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.45■□□□□ 0.86
HPF1Q9NWY4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
HPF1Q9NWY4 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.45■□□□□ 0.86
HPF1Q9NWY4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HPF1Q9NWY4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HPF1Q9NWY4 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.43■□□□□ 0.86
HPF1Q9NWY4 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 AC126544.1-201ENST00000580842 1059 ntBASIC20.43■□□□□ 0.86
HPF1Q9NWY4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HPF1Q9NWY4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.42■□□□□ 0.86
HPF1Q9NWY4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.42■□□□□ 0.86
HPF1Q9NWY4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HPF1Q9NWY4 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPF1Q9NWY4 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPF1Q9NWY4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPF1Q9NWY4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.42■□□□□ 0.86
HPF1Q9NWY4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.42■□□□□ 0.86
HPF1Q9NWY4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.42■□□□□ 0.86
HPF1Q9NWY4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
HPF1Q9NWY4 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.42■□□□□ 0.86
HPF1Q9NWY4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HPF1Q9NWY4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
HPF1Q9NWY4 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
HPF1Q9NWY4 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPF1Q9NWY4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPF1Q9NWY4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPF1Q9NWY4 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPF1Q9NWY4 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HPF1Q9NWY4 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
HPF1Q9NWY4 SLC47A1P1-202ENST00000449666 945 ntBASIC20.41■□□□□ 0.86
HPF1Q9NWY4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.41■□□□□ 0.86
HPF1Q9NWY4 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.41■□□□□ 0.86
HPF1Q9NWY4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPF1Q9NWY4 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
HPF1Q9NWY4 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPF1Q9NWY4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
HPF1Q9NWY4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms