Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.44■□□□□ 0.38
SMCO4Q9NRQ5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMCO4Q9NRQ5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMCO4Q9NRQ5 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMCO4Q9NRQ5 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 AL020996.1-203ENST00000536896 2307 ntBASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMCO4Q9NRQ5 AC080038.3-201ENST00000623346 1952 ntBASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SMCO4Q9NRQ5 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMCO4Q9NRQ5 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMCO4Q9NRQ5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMCO4Q9NRQ5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMCO4Q9NRQ5 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SMCO4Q9NRQ5 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMCO4Q9NRQ5 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMCO4Q9NRQ5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.41■□□□□ 0.38
SMCO4Q9NRQ5 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMCO4Q9NRQ5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMCO4Q9NRQ5 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMCO4Q9NRQ5 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMCO4Q9NRQ5 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMCO4Q9NRQ5 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMCO4Q9NRQ5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SMCO4Q9NRQ5 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
SMCO4Q9NRQ5 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SMCO4Q9NRQ5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.39■□□□□ 0.37
SMCO4Q9NRQ5 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMCO4Q9NRQ5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMCO4Q9NRQ5 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMCO4Q9NRQ5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.39■□□□□ 0.37
SMCO4Q9NRQ5 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.39■□□□□ 0.37
SMCO4Q9NRQ5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMCO4Q9NRQ5 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMCO4Q9NRQ5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMCO4Q9NRQ5 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC17.39■□□□□ 0.37
SMCO4Q9NRQ5 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMCO4Q9NRQ5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SMCO4Q9NRQ5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC17.39■□□□□ 0.37
SMCO4Q9NRQ5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SMCO4Q9NRQ5 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMCO4Q9NRQ5 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
SMCO4Q9NRQ5 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMCO4Q9NRQ5 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMCO4Q9NRQ5 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMCO4Q9NRQ5 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMCO4Q9NRQ5 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMCO4Q9NRQ5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
SMCO4Q9NRQ5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.38■□□□□ 0.37
SMCO4Q9NRQ5 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SMCO4Q9NRQ5 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SMCO4Q9NRQ5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms