Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.87■□□□□ 0.93
NEUROD4Q9HD90 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
NEUROD4Q9HD90 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
NEUROD4Q9HD90 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEUROD4Q9HD90 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.86■□□□□ 0.93
NEUROD4Q9HD90 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEUROD4Q9HD90 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEUROD4Q9HD90 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEUROD4Q9HD90 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.86■□□□□ 0.93
NEUROD4Q9HD90 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NEUROD4Q9HD90 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.86■□□□□ 0.93
NEUROD4Q9HD90 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.86■□□□□ 0.93
NEUROD4Q9HD90 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NEUROD4Q9HD90 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
NEUROD4Q9HD90 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEUROD4Q9HD90 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NEUROD4Q9HD90 AC008406.3-201ENST00000620001 1374 ntBASIC20.85■□□□□ 0.93
NEUROD4Q9HD90 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NEUROD4Q9HD90 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NEUROD4Q9HD90 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.85■□□□□ 0.93
NEUROD4Q9HD90 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NEUROD4Q9HD90 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.85■□□□□ 0.93
NEUROD4Q9HD90 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
NEUROD4Q9HD90 ECEL1P1-201ENST00000373592 1742 ntBASIC20.85■□□□□ 0.93
NEUROD4Q9HD90 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NEUROD4Q9HD90 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.85■□□□□ 0.93
NEUROD4Q9HD90 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.85■□□□□ 0.93
NEUROD4Q9HD90 AC242852.2-201ENST00000615738 1807 ntBASIC20.85■□□□□ 0.93
NEUROD4Q9HD90 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEUROD4Q9HD90 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
NEUROD4Q9HD90 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NEUROD4Q9HD90 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
NEUROD4Q9HD90 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.84■□□□□ 0.93
NEUROD4Q9HD90 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
NEUROD4Q9HD90 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NEUROD4Q9HD90 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NEUROD4Q9HD90 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NEUROD4Q9HD90 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NEUROD4Q9HD90 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NEUROD4Q9HD90 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.83■□□□□ 0.93
NEUROD4Q9HD90 MIR935-201ENST00000401179 91 ntBASIC20.83■□□□□ 0.93
NEUROD4Q9HD90 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.83■□□□□ 0.93
NEUROD4Q9HD90 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NEUROD4Q9HD90 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NEUROD4Q9HD90 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
NEUROD4Q9HD90 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NEUROD4Q9HD90 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NEUROD4Q9HD90 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NEUROD4Q9HD90 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
NEUROD4Q9HD90 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.83■□□□□ 0.92
NEUROD4Q9HD90 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEUROD4Q9HD90 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEUROD4Q9HD90 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NEUROD4Q9HD90 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEUROD4Q9HD90 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.82■□□□□ 0.92
NEUROD4Q9HD90 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEUROD4Q9HD90 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.82■□□□□ 0.92
NEUROD4Q9HD90 C17orf82-201ENST00000623772 1530 ntBASIC20.82■□□□□ 0.92
NEUROD4Q9HD90 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEUROD4Q9HD90 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
NEUROD4Q9HD90 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 LINC00526-201ENST00000581067 1875 ntBASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 MIR6724-1-201ENST00000616420 92 ntBASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 MIR6724-2-201ENST00000616483 92 ntBASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 MIR6724-4-201ENST00000617390 92 ntBASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 MIR6724-3-201ENST00000622482 92 ntBASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
NEUROD4Q9HD90 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
NEUROD4Q9HD90 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEUROD4Q9HD90 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
NEUROD4Q9HD90 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.8■□□□□ 0.92
NEUROD4Q9HD90 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NEUROD4Q9HD90 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEUROD4Q9HD90 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NEUROD4Q9HD90 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.8■□□□□ 0.92
NEUROD4Q9HD90 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
NEUROD4Q9HD90 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
NEUROD4Q9HD90 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEUROD4Q9HD90 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.79■□□□□ 0.92
NEUROD4Q9HD90 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NEUROD4Q9HD90 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEUROD4Q9HD90 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
NEUROD4Q9HD90 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
NEUROD4Q9HD90 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.79■□□□□ 0.92
NEUROD4Q9HD90 UNC93B8-201ENST00000511903 705 ntBASIC20.79■□□□□ 0.92
NEUROD4Q9HD90 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms