Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.47■■□□□ 1.19
LRRC40Q9H9A6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRRC40Q9H9A6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.47■■□□□ 1.19
LRRC40Q9H9A6 AL117332.1-201ENST00000622628 974 ntBASIC22.47■■□□□ 1.19
LRRC40Q9H9A6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
LRRC40Q9H9A6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.47■■□□□ 1.19
LRRC40Q9H9A6 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.47■■□□□ 1.19
LRRC40Q9H9A6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.47■■□□□ 1.19
LRRC40Q9H9A6 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LRRC40Q9H9A6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.46■■□□□ 1.19
LRRC40Q9H9A6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LRRC40Q9H9A6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.46■■□□□ 1.19
LRRC40Q9H9A6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.46■■□□□ 1.19
LRRC40Q9H9A6 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LRRC40Q9H9A6 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC22.46■■□□□ 1.19
LRRC40Q9H9A6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRC40Q9H9A6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
LRRC40Q9H9A6 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.46■■□□□ 1.19
LRRC40Q9H9A6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
LRRC40Q9H9A6 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC22.45■■□□□ 1.19
LRRC40Q9H9A6 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LRRC40Q9H9A6 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.45■■□□□ 1.18
LRRC40Q9H9A6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.45■■□□□ 1.18
LRRC40Q9H9A6 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRC40Q9H9A6 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.45■■□□□ 1.18
LRRC40Q9H9A6 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRC40Q9H9A6 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRC40Q9H9A6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRC40Q9H9A6 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRC40Q9H9A6 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRC40Q9H9A6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRC40Q9H9A6 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRC40Q9H9A6 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRC40Q9H9A6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRC40Q9H9A6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.44■■□□□ 1.18
LRRC40Q9H9A6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRC40Q9H9A6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LRRC40Q9H9A6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.44■■□□□ 1.18
LRRC40Q9H9A6 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
LRRC40Q9H9A6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.44■■□□□ 1.18
LRRC40Q9H9A6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LRRC40Q9H9A6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.44■■□□□ 1.18
LRRC40Q9H9A6 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.44■■□□□ 1.18
LRRC40Q9H9A6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 AL356740.2-201ENST00000601559 647 ntBASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 EP400NL-214ENST00000641289 2402 ntBASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 ECEL1P1-201ENST00000373592 1742 ntBASIC22.43■■□□□ 1.18
LRRC40Q9H9A6 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.42■■□□□ 1.18
LRRC40Q9H9A6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
LRRC40Q9H9A6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LRRC40Q9H9A6 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRC40Q9H9A6 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LRRC40Q9H9A6 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRC40Q9H9A6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
LRRC40Q9H9A6 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRC40Q9H9A6 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRC40Q9H9A6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
LRRC40Q9H9A6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC22.42■■□□□ 1.18
LRRC40Q9H9A6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRC40Q9H9A6 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC22.41■■□□□ 1.18
LRRC40Q9H9A6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LRRC40Q9H9A6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRC40Q9H9A6 AC127496.7-201ENST00000625110 1798 ntBASIC22.41■■□□□ 1.18
LRRC40Q9H9A6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRC40Q9H9A6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.41■■□□□ 1.18
LRRC40Q9H9A6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRC40Q9H9A6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRC40Q9H9A6 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.41■■□□□ 1.18
LRRC40Q9H9A6 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 MIR3621-201ENST00000580529 85 ntBASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 LINC00526-201ENST00000581067 1875 ntBASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRC40Q9H9A6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
LRRC40Q9H9A6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
LRRC40Q9H9A6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.18
LRRC40Q9H9A6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
LRRC40Q9H9A6 AC241377.3-202ENST00000626088 1088 ntBASIC22.39■■□□□ 1.17
LRRC40Q9H9A6 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms