Protein–RNA interactions for Protein: Q9H6L5

RETREG1, Reticulophagy regulator 1, humanhuman

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1Q9H6L5 AC004687.1-201ENST00000579003 1625 ntBASIC22.65■■□□□ 1.22
RETREG1Q9H6L5 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG1Q9H6L5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.65■■□□□ 1.22
RETREG1Q9H6L5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
RETREG1Q9H6L5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG1Q9H6L5 AP005435.1-201ENST00000529293 1178 ntBASIC22.65■■□□□ 1.22
RETREG1Q9H6L5 AC027682.1-201ENST00000562846 899 ntBASIC22.65■■□□□ 1.22
RETREG1Q9H6L5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG1Q9H6L5 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.65■■□□□ 1.22
RETREG1Q9H6L5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.65■■□□□ 1.22
RETREG1Q9H6L5 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG1Q9H6L5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG1Q9H6L5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RETREG1Q9H6L5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
RETREG1Q9H6L5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC22.64■■□□□ 1.22
RETREG1Q9H6L5 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RETREG1Q9H6L5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
RETREG1Q9H6L5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.64■■□□□ 1.21
RETREG1Q9H6L5 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.64■■□□□ 1.21
RETREG1Q9H6L5 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RETREG1Q9H6L5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RETREG1Q9H6L5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 MIR939-201ENST00000401314 82 ntBASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 AC091305.1-201ENST00000479476 895 ntBASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 RASA4CP-201ENST00000424092 1398 ntBASIC22.63■■□□□ 1.21
RETREG1Q9H6L5 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 AP001330.3-201ENST00000520123 633 ntBASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 AL136967.2-201ENST00000623968 743 ntBASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 AL031602.1-201ENST00000633169 911 ntBASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.62■■□□□ 1.21
RETREG1Q9H6L5 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.61■■□□□ 1.21
RETREG1Q9H6L5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.61■■□□□ 1.21
RETREG1Q9H6L5 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.61■■□□□ 1.21
RETREG1Q9H6L5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG1Q9H6L5 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
RETREG1Q9H6L5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG1Q9H6L5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
RETREG1Q9H6L5 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.61■■□□□ 1.21
RETREG1Q9H6L5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.61■■□□□ 1.21
RETREG1Q9H6L5 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG1Q9H6L5 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.61■■□□□ 1.21
RETREG1Q9H6L5 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RETREG1Q9H6L5 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RETREG1Q9H6L5 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.6■■□□□ 1.21
RETREG1Q9H6L5 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
RETREG1Q9H6L5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.6■■□□□ 1.21
RETREG1Q9H6L5 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
RETREG1Q9H6L5 SLC47A1P1-202ENST00000449666 945 ntBASIC22.6■■□□□ 1.21
RETREG1Q9H6L5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RETREG1Q9H6L5 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
RETREG1Q9H6L5 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
RETREG1Q9H6L5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.6■■□□□ 1.21
RETREG1Q9H6L5 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG1Q9H6L5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
RETREG1Q9H6L5 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG1Q9H6L5 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG1Q9H6L5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
RETREG1Q9H6L5 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RETREG1Q9H6L5 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
RETREG1Q9H6L5 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.58■■□□□ 1.21
RETREG1Q9H6L5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
RETREG1Q9H6L5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.58■■□□□ 1.21
RETREG1Q9H6L5 AC142381.2-201ENST00000566120 298 ntBASIC22.58■■□□□ 1.21
RETREG1Q9H6L5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RETREG1Q9H6L5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
RETREG1Q9H6L5 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
RETREG1Q9H6L5 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
RETREG1Q9H6L5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
RETREG1Q9H6L5 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.58■■□□□ 1.2
RETREG1Q9H6L5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
RETREG1Q9H6L5 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RETREG1Q9H6L5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.57■■□□□ 1.2
RETREG1Q9H6L5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.57■■□□□ 1.2
RETREG1Q9H6L5 AF213884.3-201ENST00000563833 479 ntBASIC22.57■■□□□ 1.2
RETREG1Q9H6L5 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RETREG1Q9H6L5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
RETREG1Q9H6L5 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms