Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM2Q9C040 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM2Q9C040 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
TRIM2Q9C040 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM2Q9C040 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM2Q9C040 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRIM2Q9C040 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM2Q9C040 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM2Q9C040 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM2Q9C040 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
TRIM2Q9C040 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM2Q9C040 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM2Q9C040 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
TRIM2Q9C040 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
TRIM2Q9C040 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM2Q9C040 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.31■□□□□ 0.84
TRIM2Q9C040 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM2Q9C040 KRT16P3-201ENST00000439127 1283 ntBASIC20.31■□□□□ 0.84
TRIM2Q9C040 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.31■□□□□ 0.84
TRIM2Q9C040 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM2Q9C040 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM2Q9C040 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM2Q9C040 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM2Q9C040 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TRIM2Q9C040 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM2Q9C040 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM2Q9C040 DUX4L4-201ENST00000566884 1269 ntBASIC20.3■□□□□ 0.84
TRIM2Q9C040 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
TRIM2Q9C040 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM2Q9C040 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.3■□□□□ 0.84
TRIM2Q9C040 AC009102.2-201ENST00000606772 1639 ntBASIC20.3■□□□□ 0.84
TRIM2Q9C040 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.3■□□□□ 0.84
TRIM2Q9C040 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM2Q9C040 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM2Q9C040 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TRIM2Q9C040 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRIM2Q9C040 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM2Q9C040 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM2Q9C040 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM2Q9C040 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TRIM2Q9C040 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM2Q9C040 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM2Q9C040 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.29■□□□□ 0.84
TRIM2Q9C040 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM2Q9C040 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM2Q9C040 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM2Q9C040 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM2Q9C040 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
TRIM2Q9C040 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM2Q9C040 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TRIM2Q9C040 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM2Q9C040 GUSBP5-202ENST00000510805 1989 ntBASIC20.28■□□□□ 0.84
TRIM2Q9C040 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM2Q9C040 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM2Q9C040 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM2Q9C040 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM2Q9C040 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.28■□□□□ 0.84
TRIM2Q9C040 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM2Q9C040 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM2Q9C040 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM2Q9C040 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM2Q9C040 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM2Q9C040 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM2Q9C040 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM2Q9C040 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM2Q9C040 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM2Q9C040 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRIM2Q9C040 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM2Q9C040 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM2Q9C040 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM2Q9C040 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM2Q9C040 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.27■□□□□ 0.84
TRIM2Q9C040 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.27■□□□□ 0.84
TRIM2Q9C040 AC009086.3-201ENST00000623486 1008 ntBASIC20.27■□□□□ 0.84
TRIM2Q9C040 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM2Q9C040 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM2Q9C040 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM2Q9C040 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM2Q9C040 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM2Q9C040 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM2Q9C040 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRIM2Q9C040 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRIM2Q9C040 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM2Q9C040 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM2Q9C040 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM2Q9C040 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM2Q9C040 MIR6724-1-201ENST00000616420 92 ntBASIC20.26■□□□□ 0.83
TRIM2Q9C040 MIR6724-2-201ENST00000616483 92 ntBASIC20.26■□□□□ 0.83
TRIM2Q9C040 MIR6724-4-201ENST00000617390 92 ntBASIC20.26■□□□□ 0.83
TRIM2Q9C040 MIR6724-3-201ENST00000622482 92 ntBASIC20.26■□□□□ 0.83
TRIM2Q9C040 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM2Q9C040 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRIM2Q9C040 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM2Q9C040 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM2Q9C040 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM2Q9C040 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM2Q9C040 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM2Q9C040 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM2Q9C040 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM2Q9C040 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms