Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDCA4Q9BXL8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDCA4Q9BXL8 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.87■□□□□ 0.77
CDCA4Q9BXL8 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDCA4Q9BXL8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CDCA4Q9BXL8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA4Q9BXL8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA4Q9BXL8 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA4Q9BXL8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA4Q9BXL8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.86■□□□□ 0.77
CDCA4Q9BXL8 AC133552.2-201ENST00000619106 1032 ntBASIC19.86■□□□□ 0.77
CDCA4Q9BXL8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA4Q9BXL8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA4Q9BXL8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CDCA4Q9BXL8 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CDCA4Q9BXL8 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CDCA4Q9BXL8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDCA4Q9BXL8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CDCA4Q9BXL8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA4Q9BXL8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDCA4Q9BXL8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
CDCA4Q9BXL8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA4Q9BXL8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDCA4Q9BXL8 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA4Q9BXL8 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CDCA4Q9BXL8 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CDCA4Q9BXL8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA4Q9BXL8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA4Q9BXL8 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CDCA4Q9BXL8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA4Q9BXL8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA4Q9BXL8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA4Q9BXL8 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CDCA4Q9BXL8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA4Q9BXL8 AC018755.3-202ENST00000596210 929 ntBASIC19.84■□□□□ 0.77
CDCA4Q9BXL8 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA4Q9BXL8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.84■□□□□ 0.77
CDCA4Q9BXL8 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.84■□□□□ 0.77
CDCA4Q9BXL8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA4Q9BXL8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CDCA4Q9BXL8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.83■□□□□ 0.77
CDCA4Q9BXL8 NTF6A-201ENST00000591175 560 ntBASIC19.83■□□□□ 0.77
CDCA4Q9BXL8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.83■□□□□ 0.76
CDCA4Q9BXL8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDCA4Q9BXL8 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CDCA4Q9BXL8 AC073130.3-201ENST00000624389 2278 ntBASIC19.82■□□□□ 0.76
CDCA4Q9BXL8 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA4Q9BXL8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA4Q9BXL8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA4Q9BXL8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA4Q9BXL8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
CDCA4Q9BXL8 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA4Q9BXL8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.82■□□□□ 0.76
CDCA4Q9BXL8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDCA4Q9BXL8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.82■□□□□ 0.76
CDCA4Q9BXL8 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDCA4Q9BXL8 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CDCA4Q9BXL8 AC005229.4-201ENST00000610085 2198 ntBASIC19.81■□□□□ 0.76
CDCA4Q9BXL8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDCA4Q9BXL8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.81■□□□□ 0.76
CDCA4Q9BXL8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.81■□□□□ 0.76
CDCA4Q9BXL8 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDCA4Q9BXL8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA4Q9BXL8 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDCA4Q9BXL8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA4Q9BXL8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA4Q9BXL8 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.79■□□□□ 0.76
CDCA4Q9BXL8 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.79■□□□□ 0.76
CDCA4Q9BXL8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA4Q9BXL8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA4Q9BXL8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA4Q9BXL8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA4Q9BXL8 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.79■□□□□ 0.76
CDCA4Q9BXL8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
CDCA4Q9BXL8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDCA4Q9BXL8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.78■□□□□ 0.76
CDCA4Q9BXL8 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA4Q9BXL8 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA4Q9BXL8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CDCA4Q9BXL8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.78■□□□□ 0.76
CDCA4Q9BXL8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.78■□□□□ 0.76
CDCA4Q9BXL8 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms