Protein–RNA interactions for Protein: Q9BWW7

SCRT1, Transcriptional repressor scratch 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT1Q9BWW7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
SCRT1Q9BWW7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC17.72■□□□□ 0.43
SCRT1Q9BWW7 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCRT1Q9BWW7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.71■□□□□ 0.43
SCRT1Q9BWW7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCRT1Q9BWW7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.71■□□□□ 0.43
SCRT1Q9BWW7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC17.71■□□□□ 0.43
SCRT1Q9BWW7 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCRT1Q9BWW7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SCRT1Q9BWW7 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SCRT1Q9BWW7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SCRT1Q9BWW7 AL161729.1-201ENST00000604104 1402 ntBASIC17.71■□□□□ 0.43
SCRT1Q9BWW7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC17.71■□□□□ 0.42
SCRT1Q9BWW7 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCRT1Q9BWW7 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SCRT1Q9BWW7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
SCRT1Q9BWW7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCRT1Q9BWW7 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCRT1Q9BWW7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SCRT1Q9BWW7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.7■□□□□ 0.42
SCRT1Q9BWW7 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.7■□□□□ 0.42
SCRT1Q9BWW7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.7■□□□□ 0.42
SCRT1Q9BWW7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 FAM99A-202ENST00000538190 1989 ntBASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SCRT1Q9BWW7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SCRT1Q9BWW7 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 AL592295.1-201ENST00000400984 884 ntBASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 AC087393.1-201ENST00000582896 145 ntBASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SCRT1Q9BWW7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 ABHD17AP5-201ENST00000580133 923 ntBASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 MIR6765-201ENST00000614092 87 ntBASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SCRT1Q9BWW7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCRT1Q9BWW7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.65■□□□□ 0.42
SCRT1Q9BWW7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.65■□□□□ 0.42
SCRT1Q9BWW7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.65■□□□□ 0.42
SCRT1Q9BWW7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SCRT1Q9BWW7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.65■□□□□ 0.42
SCRT1Q9BWW7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SCRT1Q9BWW7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms