Protein–RNA interactions for Protein: Q9BWJ5

SF3B5, Splicing factor 3B subunit 5, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5Q9BWJ5 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.69■□□□□ 0.74
SF3B5Q9BWJ5 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SF3B5Q9BWJ5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.69■□□□□ 0.74
SF3B5Q9BWJ5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SF3B5Q9BWJ5 AC004687.1-201ENST00000579003 1625 ntBASIC19.69■□□□□ 0.74
SF3B5Q9BWJ5 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.69■□□□□ 0.74
SF3B5Q9BWJ5 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SF3B5Q9BWJ5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SF3B5Q9BWJ5 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SF3B5Q9BWJ5 AC096631.2-201ENST00000436136 790 ntBASIC19.67■□□□□ 0.74
SF3B5Q9BWJ5 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.67■□□□□ 0.74
SF3B5Q9BWJ5 AL136162.1-201ENST00000607711 1078 ntBASIC19.67■□□□□ 0.74
SF3B5Q9BWJ5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
SF3B5Q9BWJ5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SF3B5Q9BWJ5 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SF3B5Q9BWJ5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.67■□□□□ 0.74
SF3B5Q9BWJ5 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.67■□□□□ 0.74
SF3B5Q9BWJ5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SF3B5Q9BWJ5 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
SF3B5Q9BWJ5 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SF3B5Q9BWJ5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 OR2I1P-207ENST00000453522 948 ntBASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 AC135279.3-201ENST00000610945 1311 ntBASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.66■□□□□ 0.74
SF3B5Q9BWJ5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
SF3B5Q9BWJ5 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.65■□□□□ 0.74
SF3B5Q9BWJ5 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SF3B5Q9BWJ5 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.65■□□□□ 0.74
SF3B5Q9BWJ5 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SF3B5Q9BWJ5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SF3B5Q9BWJ5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.65■□□□□ 0.74
SF3B5Q9BWJ5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.65■□□□□ 0.74
SF3B5Q9BWJ5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.65■□□□□ 0.74
SF3B5Q9BWJ5 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SF3B5Q9BWJ5 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SF3B5Q9BWJ5 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SF3B5Q9BWJ5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SF3B5Q9BWJ5 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.64■□□□□ 0.74
SF3B5Q9BWJ5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SF3B5Q9BWJ5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SF3B5Q9BWJ5 AC024257.2-201ENST00000549699 147 ntBASIC19.64■□□□□ 0.73
SF3B5Q9BWJ5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.64■□□□□ 0.73
SF3B5Q9BWJ5 AC106739.1-201ENST00000617035 715 ntBASIC19.64■□□□□ 0.73
SF3B5Q9BWJ5 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SF3B5Q9BWJ5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.64■□□□□ 0.73
SF3B5Q9BWJ5 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.64■□□□□ 0.73
SF3B5Q9BWJ5 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SF3B5Q9BWJ5 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.62■□□□□ 0.73
SF3B5Q9BWJ5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.62■□□□□ 0.73
SF3B5Q9BWJ5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms