Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 AC144652.1-201ENST00000609974 1624 ntBASIC19.78■□□□□ 0.76
FOXN4Q96NZ1 AC010997.5-201ENST00000609182 354 ntBASIC19.78■□□□□ 0.76
FOXN4Q96NZ1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN4Q96NZ1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN4Q96NZ1 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
FOXN4Q96NZ1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN4Q96NZ1 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN4Q96NZ1 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN4Q96NZ1 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
FOXN4Q96NZ1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN4Q96NZ1 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
FOXN4Q96NZ1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
FOXN4Q96NZ1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.77■□□□□ 0.76
FOXN4Q96NZ1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN4Q96NZ1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN4Q96NZ1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN4Q96NZ1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN4Q96NZ1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
FOXN4Q96NZ1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.77■□□□□ 0.76
FOXN4Q96NZ1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN4Q96NZ1 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN4Q96NZ1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN4Q96NZ1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.76■□□□□ 0.75
FOXN4Q96NZ1 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.76■□□□□ 0.75
FOXN4Q96NZ1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN4Q96NZ1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN4Q96NZ1 AC079834.2-201ENST00000609776 1949 ntBASIC19.76■□□□□ 0.75
FOXN4Q96NZ1 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN4Q96NZ1 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
FOXN4Q96NZ1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN4Q96NZ1 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
FOXN4Q96NZ1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 GUSBP5-202ENST00000510805 1989 ntBASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
FOXN4Q96NZ1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
FOXN4Q96NZ1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN4Q96NZ1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.73■□□□□ 0.75
FOXN4Q96NZ1 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN4Q96NZ1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXN4Q96NZ1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN4Q96NZ1 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN4Q96NZ1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.73■□□□□ 0.75
FOXN4Q96NZ1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.73■□□□□ 0.75
FOXN4Q96NZ1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN4Q96NZ1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
FOXN4Q96NZ1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN4Q96NZ1 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
FOXN4Q96NZ1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXN4Q96NZ1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN4Q96NZ1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN4Q96NZ1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN4Q96NZ1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN4Q96NZ1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.72■□□□□ 0.75
FOXN4Q96NZ1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.72■□□□□ 0.75
FOXN4Q96NZ1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN4Q96NZ1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN4Q96NZ1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN4Q96NZ1 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN4Q96NZ1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN4Q96NZ1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN4Q96NZ1 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 MIR6724-1-201ENST00000616420 92 ntBASIC19.71■□□□□ 0.75
FOXN4Q96NZ1 MIR6724-2-201ENST00000616483 92 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms