Protein–RNA interactions for Protein: Q96HR8

NAF1, H/ACA ribonucleoprotein complex non-core subunit NAF1, humanhuman

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NAF1Q96HR8 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.19■■□□□ 1.14
NAF1Q96HR8 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
NAF1Q96HR8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
NAF1Q96HR8 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
NAF1Q96HR8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NAF1Q96HR8 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NAF1Q96HR8 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
NAF1Q96HR8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NAF1Q96HR8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NAF1Q96HR8 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
NAF1Q96HR8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
NAF1Q96HR8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NAF1Q96HR8 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NAF1Q96HR8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
NAF1Q96HR8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
NAF1Q96HR8 SRD5A1P1-201ENST00000442297 786 ntBASIC22.18■■□□□ 1.14
NAF1Q96HR8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
NAF1Q96HR8 ANKRD20A6P-201ENST00000618763 204 ntBASIC22.18■■□□□ 1.14
NAF1Q96HR8 AL355001.2-201ENST00000620617 1191 ntBASIC22.18■■□□□ 1.14
NAF1Q96HR8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.18■■□□□ 1.14
NAF1Q96HR8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
NAF1Q96HR8 SLC6A10P-202ENST00000431994 2058 ntBASIC22.18■■□□□ 1.14
NAF1Q96HR8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NAF1Q96HR8 DUSP8P3-201ENST00000399571 1760 ntBASIC22.17■■□□□ 1.14
NAF1Q96HR8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NAF1Q96HR8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
NAF1Q96HR8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.17■■□□□ 1.14
NAF1Q96HR8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.17■■□□□ 1.14
NAF1Q96HR8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.17■■□□□ 1.14
NAF1Q96HR8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NAF1Q96HR8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
NAF1Q96HR8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
NAF1Q96HR8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
NAF1Q96HR8 MYB-221ENST00000527615 2381 ntTSL 5 BASIC22.17■■□□□ 1.14
NAF1Q96HR8 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
NAF1Q96HR8 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
NAF1Q96HR8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NAF1Q96HR8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
NAF1Q96HR8 EDA-201ENST00000338901 1233 ntBASIC22.16■■□□□ 1.14
NAF1Q96HR8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.16■■□□□ 1.14
NAF1Q96HR8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NAF1Q96HR8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC22.16■■□□□ 1.14
NAF1Q96HR8 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
NAF1Q96HR8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
NAF1Q96HR8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
NAF1Q96HR8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NAF1Q96HR8 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NAF1Q96HR8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NAF1Q96HR8 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NAF1Q96HR8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NAF1Q96HR8 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.15■■□□□ 1.14
NAF1Q96HR8 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NAF1Q96HR8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NAF1Q96HR8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.14■■□□□ 1.14
NAF1Q96HR8 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
NAF1Q96HR8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
NAF1Q96HR8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
NAF1Q96HR8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
NAF1Q96HR8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
NAF1Q96HR8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.14
NAF1Q96HR8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.14
NAF1Q96HR8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NAF1Q96HR8 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
NAF1Q96HR8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.14■■□□□ 1.13
NAF1Q96HR8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.14■■□□□ 1.13
NAF1Q96HR8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.14■■□□□ 1.13
NAF1Q96HR8 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
NAF1Q96HR8 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.14■■□□□ 1.13
NAF1Q96HR8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
NAF1Q96HR8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
NAF1Q96HR8 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
NAF1Q96HR8 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
NAF1Q96HR8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.13■■□□□ 1.13
NAF1Q96HR8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC22.13■■□□□ 1.13
NAF1Q96HR8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
NAF1Q96HR8 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
NAF1Q96HR8 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.13■■□□□ 1.13
NAF1Q96HR8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
NAF1Q96HR8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC22.12■■□□□ 1.13
NAF1Q96HR8 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NAF1Q96HR8 GUSBP5-202ENST00000510805 1989 ntBASIC22.12■■□□□ 1.13
NAF1Q96HR8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
NAF1Q96HR8 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.12■■□□□ 1.13
NAF1Q96HR8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NAF1Q96HR8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.12■■□□□ 1.13
NAF1Q96HR8 AF213884.3-201ENST00000563833 479 ntBASIC22.12■■□□□ 1.13
NAF1Q96HR8 SNX5-217ENST00000606557 1087 ntBASIC22.12■■□□□ 1.13
NAF1Q96HR8 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
NAF1Q96HR8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NAF1Q96HR8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
NAF1Q96HR8 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC22.12■■□□□ 1.13
NAF1Q96HR8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.12■■□□□ 1.13
NAF1Q96HR8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.12■■□□□ 1.13
NAF1Q96HR8 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
NAF1Q96HR8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NAF1Q96HR8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NAF1Q96HR8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
NAF1Q96HR8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC22.11■■□□□ 1.13
NAF1Q96HR8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.11■■□□□ 1.13
NAF1Q96HR8 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms