Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE2Q96FN4 AC144652.1-201ENST00000609974 1624 ntBASIC19.13■□□□□ 0.65
CPNE2Q96FN4 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC19.13■□□□□ 0.65
CPNE2Q96FN4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CPNE2Q96FN4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CPNE2Q96FN4 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 AC242852.2-201ENST00000615738 1807 ntBASIC19.12■□□□□ 0.65
CPNE2Q96FN4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 AC137630.3-201ENST00000607245 391 ntBASIC19.12■□□□□ 0.65
CPNE2Q96FN4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CPNE2Q96FN4 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE2Q96FN4 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.11■□□□□ 0.65
CPNE2Q96FN4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE2Q96FN4 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE2Q96FN4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CPNE2Q96FN4 AC005703.6-201ENST00000623265 1329 ntBASIC19.11■□□□□ 0.65
CPNE2Q96FN4 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.11■□□□□ 0.65
CPNE2Q96FN4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CPNE2Q96FN4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CPNE2Q96FN4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.1■□□□□ 0.65
CPNE2Q96FN4 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE2Q96FN4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE2Q96FN4 LINC00526-201ENST00000581067 1875 ntBASIC19.1■□□□□ 0.65
CPNE2Q96FN4 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.1■□□□□ 0.65
CPNE2Q96FN4 AL031848.2-201ENST00000607670 837 ntBASIC19.1■□□□□ 0.65
CPNE2Q96FN4 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CPNE2Q96FN4 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.1■□□□□ 0.65
CPNE2Q96FN4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
CPNE2Q96FN4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE2Q96FN4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CPNE2Q96FN4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CPNE2Q96FN4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE2Q96FN4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CPNE2Q96FN4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE2Q96FN4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CPNE2Q96FN4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 AC103724.3-201ENST00000564481 992 ntBASIC19.08■□□□□ 0.64
CPNE2Q96FN4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 MIR6722-201ENST00000617286 78 ntBASIC19.08■□□□□ 0.64
CPNE2Q96FN4 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CPNE2Q96FN4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.07■□□□□ 0.64
CPNE2Q96FN4 AL033527.3-201ENST00000566366 1196 ntBASIC19.07■□□□□ 0.64
CPNE2Q96FN4 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms