Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
TTC28Q96AY4 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
TTC28Q96AY4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23■■□□□ 1.27
TTC28Q96AY4 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
TTC28Q96AY4 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23■■□□□ 1.27
TTC28Q96AY4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TTC28Q96AY4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23■■□□□ 1.27
TTC28Q96AY4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23■■□□□ 1.27
TTC28Q96AY4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC23■■□□□ 1.27
TTC28Q96AY4 MME-217ENST00000616757 1315 ntTSL 5 BASIC23■■□□□ 1.27
TTC28Q96AY4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
TTC28Q96AY4 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
TTC28Q96AY4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC22.99■■□□□ 1.27
TTC28Q96AY4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
TTC28Q96AY4 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
TTC28Q96AY4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC28Q96AY4 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC28Q96AY4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC22.99■■□□□ 1.27
TTC28Q96AY4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
TTC28Q96AY4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC22.98■■□□□ 1.27
TTC28Q96AY4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.98■■□□□ 1.27
TTC28Q96AY4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
TTC28Q96AY4 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
TTC28Q96AY4 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
TTC28Q96AY4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.98■■□□□ 1.27
TTC28Q96AY4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC22.98■■□□□ 1.27
TTC28Q96AY4 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
TTC28Q96AY4 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.97■■□□□ 1.27
TTC28Q96AY4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.97■■□□□ 1.27
TTC28Q96AY4 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.97■■□□□ 1.27
TTC28Q96AY4 UBE2DNL-204ENST00000602536 740 ntBASIC22.97■■□□□ 1.27
TTC28Q96AY4 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.97■■□□□ 1.27
TTC28Q96AY4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TTC28Q96AY4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
TTC28Q96AY4 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.97■■□□□ 1.27
TTC28Q96AY4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC22.97■■□□□ 1.27
TTC28Q96AY4 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
TTC28Q96AY4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
TTC28Q96AY4 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.96■■□□□ 1.27
TTC28Q96AY4 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC28Q96AY4 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TTC28Q96AY4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC28Q96AY4 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
TTC28Q96AY4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC22.96■■□□□ 1.27
TTC28Q96AY4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
TTC28Q96AY4 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
TTC28Q96AY4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC28Q96AY4 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC28Q96AY4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
TTC28Q96AY4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC22.96■■□□□ 1.27
TTC28Q96AY4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC22.96■■□□□ 1.27
TTC28Q96AY4 MIR4497-201ENST00000583208 89 ntBASIC22.96■■□□□ 1.27
TTC28Q96AY4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TTC28Q96AY4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.95■■□□□ 1.26
TTC28Q96AY4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.95■■□□□ 1.26
TTC28Q96AY4 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
TTC28Q96AY4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC22.95■■□□□ 1.26
TTC28Q96AY4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
TTC28Q96AY4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.95■■□□□ 1.26
TTC28Q96AY4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC22.95■■□□□ 1.26
TTC28Q96AY4 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC22.95■■□□□ 1.26
TTC28Q96AY4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.95■■□□□ 1.26
TTC28Q96AY4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
TTC28Q96AY4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
TTC28Q96AY4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
TTC28Q96AY4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC22.94■■□□□ 1.26
TTC28Q96AY4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
TTC28Q96AY4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TTC28Q96AY4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
TTC28Q96AY4 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.94■■□□□ 1.26
TTC28Q96AY4 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.94■■□□□ 1.26
TTC28Q96AY4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
TTC28Q96AY4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
TTC28Q96AY4 AL022069.1-201ENST00000568025 1636 ntBASIC22.94■■□□□ 1.26
TTC28Q96AY4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.94■■□□□ 1.26
TTC28Q96AY4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
TTC28Q96AY4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TTC28Q96AY4 KRT18P21-201ENST00000515767 1272 ntBASIC22.93■■□□□ 1.26
TTC28Q96AY4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC22.93■■□□□ 1.26
TTC28Q96AY4 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC22.93■■□□□ 1.26
TTC28Q96AY4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
TTC28Q96AY4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
TTC28Q96AY4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.93■■□□□ 1.26
TTC28Q96AY4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
TTC28Q96AY4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC22.93■■□□□ 1.26
TTC28Q96AY4 AC097639.1-201ENST00000565519 1891 ntBASIC22.93■■□□□ 1.26
TTC28Q96AY4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.92■■□□□ 1.26
TTC28Q96AY4 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
TTC28Q96AY4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TTC28Q96AY4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
TTC28Q96AY4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
TTC28Q96AY4 ABCB10P1-201ENST00000614297 2181 ntBASIC22.92■■□□□ 1.26
TTC28Q96AY4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TTC28Q96AY4 MIR718-201ENST00000390190 70 ntBASIC22.92■■□□□ 1.26
TTC28Q96AY4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.92■■□□□ 1.26
TTC28Q96AY4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC22.92■■□□□ 1.26
TTC28Q96AY4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.92■■□□□ 1.26
TTC28Q96AY4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
TTC28Q96AY4 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
TTC28Q96AY4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms