Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.01■□□□□ 0.79
PHF3Q92576 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.01■□□□□ 0.79
PHF3Q92576 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PHF3Q92576 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF3Q92576 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PHF3Q92576 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHF3Q92576 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHF3Q92576 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHF3Q92576 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20■□□□□ 0.79
PHF3Q92576 AC012414.1-201ENST00000556676 535 ntBASIC20■□□□□ 0.79
PHF3Q92576 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20■□□□□ 0.79
PHF3Q92576 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHF3Q92576 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHF3Q92576 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PHF3Q92576 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20■□□□□ 0.79
PHF3Q92576 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PHF3Q92576 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20■□□□□ 0.79
PHF3Q92576 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20■□□□□ 0.79
PHF3Q92576 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.99■□□□□ 0.79
PHF3Q92576 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF3Q92576 AC079630.1-202ENST00000618127 1840 ntBASIC19.99■□□□□ 0.79
PHF3Q92576 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.99■□□□□ 0.79
PHF3Q92576 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.99■□□□□ 0.79
PHF3Q92576 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.99■□□□□ 0.79
PHF3Q92576 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.99■□□□□ 0.79
PHF3Q92576 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.99■□□□□ 0.79
PHF3Q92576 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PHF3Q92576 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PHF3Q92576 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.99■□□□□ 0.79
PHF3Q92576 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHF3Q92576 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PHF3Q92576 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PHF3Q92576 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.98■□□□□ 0.79
PHF3Q92576 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PHF3Q92576 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHF3Q92576 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.98■□□□□ 0.79
PHF3Q92576 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.98■□□□□ 0.79
PHF3Q92576 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.98■□□□□ 0.79
PHF3Q92576 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.98■□□□□ 0.79
PHF3Q92576 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHF3Q92576 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PHF3Q92576 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.97■□□□□ 0.79
PHF3Q92576 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
PHF3Q92576 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PHF3Q92576 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.97■□□□□ 0.79
PHF3Q92576 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.97■□□□□ 0.79
PHF3Q92576 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC19.97■□□□□ 0.79
PHF3Q92576 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.97■□□□□ 0.79
PHF3Q92576 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF3Q92576 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF3Q92576 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PHF3Q92576 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.97■□□□□ 0.79
PHF3Q92576 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PHF3Q92576 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.96■□□□□ 0.79
PHF3Q92576 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC19.96■□□□□ 0.79
PHF3Q92576 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PHF3Q92576 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PHF3Q92576 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.96■□□□□ 0.79
PHF3Q92576 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.96■□□□□ 0.79
PHF3Q92576 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PHF3Q92576 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PHF3Q92576 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PHF3Q92576 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.96■□□□□ 0.79
PHF3Q92576 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHF3Q92576 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.96■□□□□ 0.79
PHF3Q92576 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PHF3Q92576 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PHF3Q92576 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.95■□□□□ 0.78
PHF3Q92576 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PHF3Q92576 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.95■□□□□ 0.78
PHF3Q92576 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.95■□□□□ 0.78
PHF3Q92576 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF3Q92576 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.95■□□□□ 0.78
PHF3Q92576 MIR572-201ENST00000384983 95 ntBASIC19.95■□□□□ 0.78
PHF3Q92576 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.95■□□□□ 0.78
PHF3Q92576 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.95■□□□□ 0.78
PHF3Q92576 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.95■□□□□ 0.78
PHF3Q92576 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.95■□□□□ 0.78
PHF3Q92576 pRNA.6-201ENST00000610482 90 ntBASIC19.95■□□□□ 0.78
PHF3Q92576 pRNA.5-201ENST00000612139 90 ntBASIC19.95■□□□□ 0.78
PHF3Q92576 pRNA.11-201ENST00000618423 90 ntBASIC19.95■□□□□ 0.78
PHF3Q92576 pRNA.13-201ENST00000619112 90 ntBASIC19.95■□□□□ 0.78
PHF3Q92576 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.95■□□□□ 0.78
PHF3Q92576 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PHF3Q92576 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF3Q92576 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF3Q92576 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
PHF3Q92576 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PHF3Q92576 AC092068.2-201ENST00000590491 1708 ntBASIC19.94■□□□□ 0.78
PHF3Q92576 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PHF3Q92576 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF3Q92576 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF3Q92576 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.94■□□□□ 0.78
PHF3Q92576 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PHF3Q92576 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.94■□□□□ 0.78
PHF3Q92576 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PHF3Q92576 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF3Q92576 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PHF3Q92576 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PHF3Q92576 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms