Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.95■□□□□ 0.62
SMIM4Q8WVI0 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM4Q8WVI0 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM4Q8WVI0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SMIM4Q8WVI0 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SMIM4Q8WVI0 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.94■□□□□ 0.62
SMIM4Q8WVI0 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM4Q8WVI0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM4Q8WVI0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.94■□□□□ 0.62
SMIM4Q8WVI0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM4Q8WVI0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SMIM4Q8WVI0 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM4Q8WVI0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.94■□□□□ 0.62
SMIM4Q8WVI0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM4Q8WVI0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM4Q8WVI0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM4Q8WVI0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SMIM4Q8WVI0 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SMIM4Q8WVI0 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.92■□□□□ 0.62
SMIM4Q8WVI0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM4Q8WVI0 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM4Q8WVI0 RPS2P7-201ENST00000447334 885 ntBASIC18.92■□□□□ 0.62
SMIM4Q8WVI0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM4Q8WVI0 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.92■□□□□ 0.62
SMIM4Q8WVI0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM4Q8WVI0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM4Q8WVI0 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
SMIM4Q8WVI0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM4Q8WVI0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM4Q8WVI0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM4Q8WVI0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SMIM4Q8WVI0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.91■□□□□ 0.62
SMIM4Q8WVI0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.9■□□□□ 0.62
SMIM4Q8WVI0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM4Q8WVI0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM4Q8WVI0 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM4Q8WVI0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.9■□□□□ 0.62
SMIM4Q8WVI0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM4Q8WVI0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM4Q8WVI0 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM4Q8WVI0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SMIM4Q8WVI0 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
SMIM4Q8WVI0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM4Q8WVI0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.89■□□□□ 0.61
SMIM4Q8WVI0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SMIM4Q8WVI0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.89■□□□□ 0.61
SMIM4Q8WVI0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM4Q8WVI0 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.89■□□□□ 0.61
SMIM4Q8WVI0 AC016575.1-201ENST00000607026 382 ntBASIC18.89■□□□□ 0.61
SMIM4Q8WVI0 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM4Q8WVI0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM4Q8WVI0 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SMIM4Q8WVI0 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.88■□□□□ 0.61
SMIM4Q8WVI0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM4Q8WVI0 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM4Q8WVI0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC18.88■□□□□ 0.61
SMIM4Q8WVI0 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM4Q8WVI0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
SMIM4Q8WVI0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM4Q8WVI0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM4Q8WVI0 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM4Q8WVI0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SMIM4Q8WVI0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM4Q8WVI0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SMIM4Q8WVI0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms