Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC27.53■■■□□ 2
SSH3Q8TE77 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
SSH3Q8TE77 PTMA-205ENST00000410064 814 ntTSL 2 BASIC27.53■■■□□ 2
SSH3Q8TE77 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC27.53■■■□□ 2
SSH3Q8TE77 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC27.53■■■□□ 2
SSH3Q8TE77 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC27.53■■■□□ 2
SSH3Q8TE77 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC27.53■■■□□ 2
SSH3Q8TE77 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC27.53■■■□□ 2
SSH3Q8TE77 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC27.52■■■□□ 2
SSH3Q8TE77 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
SSH3Q8TE77 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC27.52■■■□□ 2
SSH3Q8TE77 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC27.52■■■□□ 2
SSH3Q8TE77 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC27.52■■■□□ 2
SSH3Q8TE77 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC27.52■■■□□ 2
SSH3Q8TE77 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■■□□ 2
SSH3Q8TE77 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC27.51■■□□□ 1.99
SSH3Q8TE77 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC27.51■■□□□ 1.99
SSH3Q8TE77 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
SSH3Q8TE77 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC27.51■■□□□ 1.99
SSH3Q8TE77 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC27.51■■□□□ 1.99
SSH3Q8TE77 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SSH3Q8TE77 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
SSH3Q8TE77 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC27.51■■□□□ 1.99
SSH3Q8TE77 PBX2P1-201ENST00000493219 1291 ntBASIC27.51■■□□□ 1.99
SSH3Q8TE77 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC27.51■■□□□ 1.99
SSH3Q8TE77 MIR4767-201ENST00000582827 78 ntBASIC27.51■■□□□ 1.99
SSH3Q8TE77 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC27.51■■□□□ 1.99
SSH3Q8TE77 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
SSH3Q8TE77 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SSH3Q8TE77 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SSH3Q8TE77 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC27.5■■□□□ 1.99
SSH3Q8TE77 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
SSH3Q8TE77 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SSH3Q8TE77 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC27.5■■□□□ 1.99
SSH3Q8TE77 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC27.5■■□□□ 1.99
SSH3Q8TE77 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SSH3Q8TE77 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.5■■□□□ 1.99
SSH3Q8TE77 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SSH3Q8TE77 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
SSH3Q8TE77 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC27.5■■□□□ 1.99
SSH3Q8TE77 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
SSH3Q8TE77 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC27.49■■□□□ 1.99
SSH3Q8TE77 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC27.49■■□□□ 1.99
SSH3Q8TE77 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC27.49■■□□□ 1.99
SSH3Q8TE77 AL031432.3-201ENST00000607698 485 ntBASIC27.49■■□□□ 1.99
SSH3Q8TE77 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC27.49■■□□□ 1.99
SSH3Q8TE77 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
SSH3Q8TE77 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.49■■□□□ 1.99
SSH3Q8TE77 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
SSH3Q8TE77 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SSH3Q8TE77 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SSH3Q8TE77 SNX3-202ENST00000349379 890 ntTSL 2 BASIC27.48■■□□□ 1.99
SSH3Q8TE77 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC27.48■■□□□ 1.99
SSH3Q8TE77 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
SSH3Q8TE77 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
SSH3Q8TE77 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.47■■□□□ 1.99
SSH3Q8TE77 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.47■■□□□ 1.99
SSH3Q8TE77 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC27.47■■□□□ 1.99
SSH3Q8TE77 OR2I1P-207ENST00000453522 948 ntBASIC27.47■■□□□ 1.99
SSH3Q8TE77 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
SSH3Q8TE77 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC27.47■■□□□ 1.99
SSH3Q8TE77 AC133561.4-201ENST00000566112 224 ntBASIC27.47■■□□□ 1.99
SSH3Q8TE77 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
SSH3Q8TE77 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.47■■□□□ 1.99
SSH3Q8TE77 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC27.47■■□□□ 1.99
SSH3Q8TE77 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC27.47■■□□□ 1.99
SSH3Q8TE77 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC27.47■■□□□ 1.99
SSH3Q8TE77 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC27.46■■□□□ 1.99
SSH3Q8TE77 STX4-202ENST00000394998 1498 ntTSL 2 BASIC27.46■■□□□ 1.99
SSH3Q8TE77 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
SSH3Q8TE77 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
SSH3Q8TE77 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC27.46■■□□□ 1.99
SSH3Q8TE77 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC27.46■■□□□ 1.99
SSH3Q8TE77 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
SSH3Q8TE77 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC27.46■■□□□ 1.99
SSH3Q8TE77 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC27.46■■□□□ 1.99
SSH3Q8TE77 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.99
SSH3Q8TE77 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC27.45■■□□□ 1.99
SSH3Q8TE77 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.45■■□□□ 1.99
SSH3Q8TE77 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC27.45■■□□□ 1.98
SSH3Q8TE77 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC27.45■■□□□ 1.98
SSH3Q8TE77 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.45■■□□□ 1.98
SSH3Q8TE77 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.98
SSH3Q8TE77 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC27.45■■□□□ 1.98
SSH3Q8TE77 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
SSH3Q8TE77 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SSH3Q8TE77 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SSH3Q8TE77 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
SSH3Q8TE77 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC27.45■■□□□ 1.98
SSH3Q8TE77 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
SSH3Q8TE77 AC010525.1-201ENST00000585559 441 ntBASIC27.44■■□□□ 1.98
SSH3Q8TE77 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC27.44■■□□□ 1.98
SSH3Q8TE77 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
SSH3Q8TE77 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC27.44■■□□□ 1.98
SSH3Q8TE77 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC27.44■■□□□ 1.98
SSH3Q8TE77 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
SSH3Q8TE77 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SSH3Q8TE77 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
SSH3Q8TE77 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC27.43■■□□□ 1.98
SSH3Q8TE77 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC27.43■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms