Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD6Q8TD26 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CHD6Q8TD26 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD6Q8TD26 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.47■□□□□ 0.87
CHD6Q8TD26 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHD6Q8TD26 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.47■□□□□ 0.87
CHD6Q8TD26 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHD6Q8TD26 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
CHD6Q8TD26 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.47■□□□□ 0.87
CHD6Q8TD26 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CHD6Q8TD26 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
CHD6Q8TD26 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
CHD6Q8TD26 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CHD6Q8TD26 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.47■□□□□ 0.87
CHD6Q8TD26 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.47■□□□□ 0.87
CHD6Q8TD26 Z99916.2-201ENST00000604037 246 ntBASIC20.47■□□□□ 0.87
CHD6Q8TD26 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CHD6Q8TD26 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD6Q8TD26 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD6Q8TD26 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD6Q8TD26 KRT18P35-201ENST00000510488 1269 ntBASIC20.46■□□□□ 0.87
CHD6Q8TD26 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.46■□□□□ 0.87
CHD6Q8TD26 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.46■□□□□ 0.87
CHD6Q8TD26 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD6Q8TD26 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD6Q8TD26 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD6Q8TD26 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD6Q8TD26 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.46■□□□□ 0.87
CHD6Q8TD26 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CHD6Q8TD26 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
CHD6Q8TD26 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.46■□□□□ 0.87
CHD6Q8TD26 C2orf69P4-201ENST00000565394 541 ntBASIC20.46■□□□□ 0.87
CHD6Q8TD26 AC097493.4-201ENST00000641197 219 ntBASIC20.46■□□□□ 0.87
CHD6Q8TD26 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD6Q8TD26 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CHD6Q8TD26 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CHD6Q8TD26 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CHD6Q8TD26 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.45■□□□□ 0.86
CHD6Q8TD26 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.45■□□□□ 0.86
CHD6Q8TD26 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.45■□□□□ 0.86
CHD6Q8TD26 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.45■□□□□ 0.86
CHD6Q8TD26 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CHD6Q8TD26 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD6Q8TD26 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CHD6Q8TD26 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD6Q8TD26 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CHD6Q8TD26 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CHD6Q8TD26 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.44■□□□□ 0.86
CHD6Q8TD26 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.44■□□□□ 0.86
CHD6Q8TD26 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.44■□□□□ 0.86
CHD6Q8TD26 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.44■□□□□ 0.86
CHD6Q8TD26 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.44■□□□□ 0.86
CHD6Q8TD26 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
CHD6Q8TD26 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD6Q8TD26 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CHD6Q8TD26 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD6Q8TD26 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CHD6Q8TD26 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.43■□□□□ 0.86
CHD6Q8TD26 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.43■□□□□ 0.86
CHD6Q8TD26 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD6Q8TD26 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CHD6Q8TD26 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.43■□□□□ 0.86
CHD6Q8TD26 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.43■□□□□ 0.86
CHD6Q8TD26 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.43■□□□□ 0.86
CHD6Q8TD26 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD6Q8TD26 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHD6Q8TD26 AC026366.1-201ENST00000488803 879 ntBASIC20.42■□□□□ 0.86
CHD6Q8TD26 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.42■□□□□ 0.86
CHD6Q8TD26 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CHD6Q8TD26 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.42■□□□□ 0.86
CHD6Q8TD26 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.42■□□□□ 0.86
CHD6Q8TD26 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.42■□□□□ 0.86
CHD6Q8TD26 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CHD6Q8TD26 BX005040.4-201ENST00000637145 1518 ntBASIC20.42■□□□□ 0.86
CHD6Q8TD26 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD6Q8TD26 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD6Q8TD26 POU5F1P4-201ENST00000413175 1085 ntBASIC20.41■□□□□ 0.86
CHD6Q8TD26 SNORA78-201ENST00000459373 127 ntBASIC20.41■□□□□ 0.86
CHD6Q8TD26 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.41■□□□□ 0.86
CHD6Q8TD26 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CHD6Q8TD26 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
CHD6Q8TD26 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.41■□□□□ 0.86
CHD6Q8TD26 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.41■□□□□ 0.86
CHD6Q8TD26 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD6Q8TD26 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CHD6Q8TD26 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CHD6Q8TD26 AC010525.1-201ENST00000585559 441 ntBASIC20.41■□□□□ 0.86
CHD6Q8TD26 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CHD6Q8TD26 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
CHD6Q8TD26 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD6Q8TD26 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CHD6Q8TD26 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.4■□□□□ 0.86
CHD6Q8TD26 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CHD6Q8TD26 MYC-209ENST00000641252 345 ntBASIC20.4■□□□□ 0.86
CHD6Q8TD26 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.4■□□□□ 0.86
CHD6Q8TD26 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.4■□□□□ 0.86
CHD6Q8TD26 TMPOP1-202ENST00000424642 1267 ntBASIC20.4■□□□□ 0.86
CHD6Q8TD26 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CHD6Q8TD26 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.4■□□□□ 0.86
CHD6Q8TD26 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 12 ms