Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
LNX1Q8TBB1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
LNX1Q8TBB1 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.18■■□□□ 1.46
LNX1Q8TBB1 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC24.18■■□□□ 1.46
LNX1Q8TBB1 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC24.18■■□□□ 1.46
LNX1Q8TBB1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LNX1Q8TBB1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LNX1Q8TBB1 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
LNX1Q8TBB1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.17■■□□□ 1.46
LNX1Q8TBB1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LNX1Q8TBB1 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
LNX1Q8TBB1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
LNX1Q8TBB1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LNX1Q8TBB1 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.17■■□□□ 1.46
LNX1Q8TBB1 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
LNX1Q8TBB1 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LNX1Q8TBB1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC24.17■■□□□ 1.46
LNX1Q8TBB1 AC026271.2-201ENST00000428091 497 ntBASIC24.17■■□□□ 1.46
LNX1Q8TBB1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LNX1Q8TBB1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LNX1Q8TBB1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LNX1Q8TBB1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LNX1Q8TBB1 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
LNX1Q8TBB1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.16■■□□□ 1.46
LNX1Q8TBB1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
LNX1Q8TBB1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
LNX1Q8TBB1 AC006455.2-201ENST00000429931 906 ntBASIC24.16■■□□□ 1.46
LNX1Q8TBB1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LNX1Q8TBB1 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
LNX1Q8TBB1 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
LNX1Q8TBB1 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.15■■□□□ 1.46
LNX1Q8TBB1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC24.15■■□□□ 1.46
LNX1Q8TBB1 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.15■■□□□ 1.46
LNX1Q8TBB1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC24.15■■□□□ 1.46
LNX1Q8TBB1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC24.15■■□□□ 1.46
LNX1Q8TBB1 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LNX1Q8TBB1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
LNX1Q8TBB1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.15■■□□□ 1.46
LNX1Q8TBB1 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
LNX1Q8TBB1 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.46
LNX1Q8TBB1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
LNX1Q8TBB1 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.14■■□□□ 1.46
LNX1Q8TBB1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC24.14■■□□□ 1.45
LNX1Q8TBB1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LNX1Q8TBB1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LNX1Q8TBB1 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.14■■□□□ 1.45
LNX1Q8TBB1 CA15P2-201ENST00000611168 834 ntBASIC24.14■■□□□ 1.45
LNX1Q8TBB1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LNX1Q8TBB1 RASA4CP-201ENST00000424092 1398 ntBASIC24.14■■□□□ 1.45
LNX1Q8TBB1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
LNX1Q8TBB1 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LNX1Q8TBB1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LNX1Q8TBB1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.13■■□□□ 1.45
LNX1Q8TBB1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LNX1Q8TBB1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LNX1Q8TBB1 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
LNX1Q8TBB1 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
LNX1Q8TBB1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
LNX1Q8TBB1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC24.13■■□□□ 1.45
LNX1Q8TBB1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
LNX1Q8TBB1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24.13■■□□□ 1.45
LNX1Q8TBB1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24.13■■□□□ 1.45
LNX1Q8TBB1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
LNX1Q8TBB1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
LNX1Q8TBB1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
LNX1Q8TBB1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.12■■□□□ 1.45
LNX1Q8TBB1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
LNX1Q8TBB1 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
LNX1Q8TBB1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC24.12■■□□□ 1.45
LNX1Q8TBB1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
LNX1Q8TBB1 AC136469.2-201ENST00000623944 1028 ntBASIC24.12■■□□□ 1.45
LNX1Q8TBB1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.12■■□□□ 1.45
LNX1Q8TBB1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
LNX1Q8TBB1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.12■■□□□ 1.45
LNX1Q8TBB1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
LNX1Q8TBB1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LNX1Q8TBB1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LNX1Q8TBB1 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
LNX1Q8TBB1 AC027682.1-201ENST00000562846 899 ntBASIC24.11■■□□□ 1.45
LNX1Q8TBB1 MIR3181-201ENST00000578512 73 ntBASIC24.11■■□□□ 1.45
LNX1Q8TBB1 AC008764.7-201ENST00000593779 1081 ntBASIC24.11■■□□□ 1.45
LNX1Q8TBB1 AC009086.3-201ENST00000623486 1008 ntBASIC24.11■■□□□ 1.45
LNX1Q8TBB1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LNX1Q8TBB1 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
LNX1Q8TBB1 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
LNX1Q8TBB1 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
LNX1Q8TBB1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LNX1Q8TBB1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LNX1Q8TBB1 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LNX1Q8TBB1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
LNX1Q8TBB1 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LNX1Q8TBB1 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LNX1Q8TBB1 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC24.1■■□□□ 1.45
LNX1Q8TBB1 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.1■■□□□ 1.45
LNX1Q8TBB1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24.1■■□□□ 1.45
LNX1Q8TBB1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
LNX1Q8TBB1 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
LNX1Q8TBB1 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
LNX1Q8TBB1 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
LNX1Q8TBB1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms