Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.98■■□□□ 1.75
SMARCC2Q8TAQ2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SMARCC2Q8TAQ2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC2Q8TAQ2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.97■■□□□ 1.75
SMARCC2Q8TAQ2 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.97■■□□□ 1.75
SMARCC2Q8TAQ2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC2Q8TAQ2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC2Q8TAQ2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC2Q8TAQ2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.97■■□□□ 1.75
SMARCC2Q8TAQ2 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC2Q8TAQ2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC2Q8TAQ2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
SMARCC2Q8TAQ2 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
SMARCC2Q8TAQ2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC25.97■■□□□ 1.75
SMARCC2Q8TAQ2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMARCC2Q8TAQ2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.96■■□□□ 1.75
SMARCC2Q8TAQ2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC25.96■■□□□ 1.75
SMARCC2Q8TAQ2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SMARCC2Q8TAQ2 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
SMARCC2Q8TAQ2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SMARCC2Q8TAQ2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
SMARCC2Q8TAQ2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
SMARCC2Q8TAQ2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.96■■□□□ 1.75
SMARCC2Q8TAQ2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SMARCC2Q8TAQ2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
SMARCC2Q8TAQ2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
SMARCC2Q8TAQ2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.95■■□□□ 1.74
SMARCC2Q8TAQ2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SMARCC2Q8TAQ2 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SMARCC2Q8TAQ2 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.95■■□□□ 1.74
SMARCC2Q8TAQ2 FP325331.1-202ENST00000623531 1380 ntBASIC25.95■■□□□ 1.74
SMARCC2Q8TAQ2 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMARCC2Q8TAQ2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMARCC2Q8TAQ2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.94■■□□□ 1.74
SMARCC2Q8TAQ2 AC096631.2-201ENST00000436136 790 ntBASIC25.94■■□□□ 1.74
SMARCC2Q8TAQ2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMARCC2Q8TAQ2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 LINC01529-204ENST00000636474 1715 ntBASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 ESRRAP2-201ENST00000418437 1549 ntBASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 GUSBP5-202ENST00000510805 1989 ntBASIC25.93■■□□□ 1.74
SMARCC2Q8TAQ2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
SMARCC2Q8TAQ2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC2Q8TAQ2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC2Q8TAQ2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.92■■□□□ 1.74
SMARCC2Q8TAQ2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC2Q8TAQ2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.92■■□□□ 1.74
SMARCC2Q8TAQ2 AL139246.5-201ENST00000606645 996 ntBASIC25.92■■□□□ 1.74
SMARCC2Q8TAQ2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.92■■□□□ 1.74
SMARCC2Q8TAQ2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC2Q8TAQ2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC2Q8TAQ2 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC2Q8TAQ2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
SMARCC2Q8TAQ2 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
SMARCC2Q8TAQ2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
SMARCC2Q8TAQ2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SMARCC2Q8TAQ2 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC25.91■■□□□ 1.74
SMARCC2Q8TAQ2 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
SMARCC2Q8TAQ2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMARCC2Q8TAQ2 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SMARCC2Q8TAQ2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SMARCC2Q8TAQ2 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.91■■□□□ 1.74
SMARCC2Q8TAQ2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
SMARCC2Q8TAQ2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SMARCC2Q8TAQ2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.91■■□□□ 1.74
SMARCC2Q8TAQ2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC2Q8TAQ2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC2Q8TAQ2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC2Q8TAQ2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC2Q8TAQ2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC2Q8TAQ2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC2Q8TAQ2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC2Q8TAQ2 DUX4L4-201ENST00000566884 1269 ntBASIC25.9■■□□□ 1.74
SMARCC2Q8TAQ2 AC110285.6-201ENST00000617652 491 ntBASIC25.9■■□□□ 1.74
SMARCC2Q8TAQ2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMARCC2Q8TAQ2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.9■■□□□ 1.74
SMARCC2Q8TAQ2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
SMARCC2Q8TAQ2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.74
SMARCC2Q8TAQ2 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.74
SMARCC2Q8TAQ2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
SMARCC2Q8TAQ2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
SMARCC2Q8TAQ2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SMARCC2Q8TAQ2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.89■■□□□ 1.74
SMARCC2Q8TAQ2 EP400NL-214ENST00000641289 2402 ntBASIC25.89■■□□□ 1.73
SMARCC2Q8TAQ2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SMARCC2Q8TAQ2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
SMARCC2Q8TAQ2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
SMARCC2Q8TAQ2 C17orf82-201ENST00000623772 1530 ntBASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms