Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 BX664725.1-201ENST00000438252 379 ntBASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 AC144652.1-201ENST00000609974 1624 ntBASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TMEM116Q8NCL8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
TMEM116Q8NCL8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TMEM116Q8NCL8 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 RNF146-205ENST00000477776 762 ntTSL 3 BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TMEM116Q8NCL8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 LINC00565-201ENST00000562710 2331 ntBASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TMEM116Q8NCL8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM116Q8NCL8 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM116Q8NCL8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM116Q8NCL8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.42■□□□□ 0.38
TMEM116Q8NCL8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.42■□□□□ 0.38
TMEM116Q8NCL8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM116Q8NCL8 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC17.42■□□□□ 0.38
TMEM116Q8NCL8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM116Q8NCL8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM116Q8NCL8 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM116Q8NCL8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM116Q8NCL8 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
TMEM116Q8NCL8 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TMEM116Q8NCL8 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.42■□□□□ 0.38
TMEM116Q8NCL8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 KRT125P-201ENST00000546827 989 ntBASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 MIR6722-201ENST00000617286 78 ntBASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TMEM116Q8NCL8 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms