Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SIX5Q8N196 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SIX5Q8N196 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.77■■□□□ 1.24
SIX5Q8N196 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
SIX5Q8N196 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.76■■□□□ 1.23
SIX5Q8N196 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.76■■□□□ 1.23
SIX5Q8N196 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SIX5Q8N196 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
SIX5Q8N196 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC22.76■■□□□ 1.23
SIX5Q8N196 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
SIX5Q8N196 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
SIX5Q8N196 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.76■■□□□ 1.23
SIX5Q8N196 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SIX5Q8N196 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SIX5Q8N196 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SIX5Q8N196 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
SIX5Q8N196 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
SIX5Q8N196 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SIX5Q8N196 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SIX5Q8N196 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.75■■□□□ 1.23
SIX5Q8N196 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SIX5Q8N196 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SIX5Q8N196 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
SIX5Q8N196 MIR663A-201ENST00000385250 93 ntBASIC22.75■■□□□ 1.23
SIX5Q8N196 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.75■■□□□ 1.23
SIX5Q8N196 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
SIX5Q8N196 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
SIX5Q8N196 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
SIX5Q8N196 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.74■■□□□ 1.23
SIX5Q8N196 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SIX5Q8N196 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.74■■□□□ 1.23
SIX5Q8N196 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
SIX5Q8N196 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.74■■□□□ 1.23
SIX5Q8N196 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SIX5Q8N196 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
SIX5Q8N196 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SIX5Q8N196 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SIX5Q8N196 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.74■■□□□ 1.23
SIX5Q8N196 DUX4L4-201ENST00000566884 1269 ntBASIC22.74■■□□□ 1.23
SIX5Q8N196 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SIX5Q8N196 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
SIX5Q8N196 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
SIX5Q8N196 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
SIX5Q8N196 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
SIX5Q8N196 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.73■■□□□ 1.23
SIX5Q8N196 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SIX5Q8N196 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.73■■□□□ 1.23
SIX5Q8N196 GPX1P1-201ENST00000388829 606 ntBASIC22.73■■□□□ 1.23
SIX5Q8N196 KRT19P1-201ENST00000405746 1186 ntBASIC22.73■■□□□ 1.23
SIX5Q8N196 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.73■■□□□ 1.23
SIX5Q8N196 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.73■■□□□ 1.23
SIX5Q8N196 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC22.73■■□□□ 1.23
SIX5Q8N196 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
SIX5Q8N196 RARA-203ENST00000394086 2008 ntTSL 2 BASIC22.72■■□□□ 1.23
SIX5Q8N196 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
SIX5Q8N196 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SIX5Q8N196 TSPY20P-201ENST00000450910 630 ntBASIC22.72■■□□□ 1.23
SIX5Q8N196 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC22.72■■□□□ 1.23
SIX5Q8N196 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SIX5Q8N196 AC011767.1-201ENST00000617410 1153 ntBASIC22.72■■□□□ 1.23
SIX5Q8N196 FP325331.1-202ENST00000623531 1380 ntBASIC22.72■■□□□ 1.23
SIX5Q8N196 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
SIX5Q8N196 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
SIX5Q8N196 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC22.71■■□□□ 1.23
SIX5Q8N196 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC22.71■■□□□ 1.23
SIX5Q8N196 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SIX5Q8N196 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SIX5Q8N196 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
SIX5Q8N196 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.71■■□□□ 1.23
SIX5Q8N196 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
SIX5Q8N196 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.71■■□□□ 1.23
SIX5Q8N196 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
SIX5Q8N196 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.71■■□□□ 1.23
SIX5Q8N196 APTR-205ENST00000447009 902 ntTSL 2 BASIC22.71■■□□□ 1.23
SIX5Q8N196 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC22.71■■□□□ 1.23
SIX5Q8N196 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC22.71■■□□□ 1.23
SIX5Q8N196 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC22.71■■□□□ 1.23
SIX5Q8N196 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
SIX5Q8N196 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SIX5Q8N196 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SIX5Q8N196 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC22.7■■□□□ 1.22
SIX5Q8N196 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SIX5Q8N196 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
SIX5Q8N196 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.7■■□□□ 1.22
SIX5Q8N196 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SIX5Q8N196 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.7■■□□□ 1.22
SIX5Q8N196 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.7■■□□□ 1.22
SIX5Q8N196 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
SIX5Q8N196 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.7■■□□□ 1.22
SIX5Q8N196 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SIX5Q8N196 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.69■■□□□ 1.22
SIX5Q8N196 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SIX5Q8N196 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
SIX5Q8N196 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
SIX5Q8N196 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
SIX5Q8N196 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.69■■□□□ 1.22
SIX5Q8N196 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SIX5Q8N196 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.69■■□□□ 1.22
SIX5Q8N196 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
SIX5Q8N196 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC22.69■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms