Protein–RNA interactions for Protein: Q7Z419

RNF144B, E3 ubiquitin-protein ligase RNF144B, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144BQ7Z419 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF144BQ7Z419 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144BQ7Z419 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144BQ7Z419 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.02■□□□□ 0.64
RNF144BQ7Z419 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144BQ7Z419 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF144BQ7Z419 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF144BQ7Z419 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.63
RNF144BQ7Z419 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144BQ7Z419 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144BQ7Z419 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.01■□□□□ 0.63
RNF144BQ7Z419 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144BQ7Z419 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.01■□□□□ 0.63
RNF144BQ7Z419 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF144BQ7Z419 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.01■□□□□ 0.63
RNF144BQ7Z419 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RNF144BQ7Z419 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144BQ7Z419 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144BQ7Z419 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19■□□□□ 0.63
RNF144BQ7Z419 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144BQ7Z419 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RNF144BQ7Z419 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RNF144BQ7Z419 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19■□□□□ 0.63
RNF144BQ7Z419 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144BQ7Z419 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF144BQ7Z419 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144BQ7Z419 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144BQ7Z419 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19■□□□□ 0.63
RNF144BQ7Z419 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144BQ7Z419 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RNF144BQ7Z419 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RNF144BQ7Z419 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RNF144BQ7Z419 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19■□□□□ 0.63
RNF144BQ7Z419 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144BQ7Z419 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF144BQ7Z419 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144BQ7Z419 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144BQ7Z419 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF144BQ7Z419 MIR6722-201ENST00000617286 78 ntBASIC18.99■□□□□ 0.63
RNF144BQ7Z419 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144BQ7Z419 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RNF144BQ7Z419 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144BQ7Z419 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RNF144BQ7Z419 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144BQ7Z419 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144BQ7Z419 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144BQ7Z419 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144BQ7Z419 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144BQ7Z419 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.98■□□□□ 0.63
RNF144BQ7Z419 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144BQ7Z419 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144BQ7Z419 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144BQ7Z419 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144BQ7Z419 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.98■□□□□ 0.63
RNF144BQ7Z419 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144BQ7Z419 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF144BQ7Z419 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
RNF144BQ7Z419 AC005703.6-201ENST00000623265 1329 ntBASIC18.98■□□□□ 0.63
RNF144BQ7Z419 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144BQ7Z419 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144BQ7Z419 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.97■□□□□ 0.63
RNF144BQ7Z419 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF144BQ7Z419 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RNF144BQ7Z419 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144BQ7Z419 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.97■□□□□ 0.63
RNF144BQ7Z419 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
RNF144BQ7Z419 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144BQ7Z419 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF144BQ7Z419 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RNF144BQ7Z419 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RNF144BQ7Z419 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF144BQ7Z419 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RNF144BQ7Z419 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF144BQ7Z419 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF144BQ7Z419 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF144BQ7Z419 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RNF144BQ7Z419 AC137767.1-201ENST00000602918 1920 ntBASIC18.96■□□□□ 0.63
RNF144BQ7Z419 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF144BQ7Z419 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF144BQ7Z419 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF144BQ7Z419 LINC01529-204ENST00000636474 1715 ntBASIC18.95■□□□□ 0.62
RNF144BQ7Z419 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF144BQ7Z419 BX664725.1-201ENST00000438252 379 ntBASIC18.95■□□□□ 0.62
RNF144BQ7Z419 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.95■□□□□ 0.62
RNF144BQ7Z419 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF144BQ7Z419 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF144BQ7Z419 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RNF144BQ7Z419 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF144BQ7Z419 AC092053.2-201ENST00000640557 1818 ntBASIC18.95■□□□□ 0.62
RNF144BQ7Z419 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF144BQ7Z419 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF144BQ7Z419 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RNF144BQ7Z419 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF144BQ7Z419 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF144BQ7Z419 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF144BQ7Z419 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF144BQ7Z419 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF144BQ7Z419 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF144BQ7Z419 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF144BQ7Z419 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms