Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 APRT-207ENST00000567391 667 ntTSL 313.01□□□□□ -0.333e-9■■■■□ 23.3
LARP4Q71RC2 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.333e-9■■■■□ 23.3
LARP4Q71RC2 APRT-210ENST00000568575 490 ntTSL 211.76□□□□□ -0.533e-9■■■■□ 23.3
LARP4Q71RC2 APRT-209ENST00000568319 542 ntTSL 311.76□□□□□ -0.533e-9■■■■□ 23.3
LARP4Q71RC2 APRT-202ENST00000426324 664 ntTSL 2 BASIC11.33□□□□□ -0.63e-9■■■■□ 23.3
LARP4Q71RC2 APRT-208ENST00000567713 470 ntTSL 510.92□□□□□ -0.663e-9■■■■□ 23.3
LARP4Q71RC2 APRT-206ENST00000567057 437 ntTSL 210.08□□□□□ -0.83e-9■■■■□ 23.3
LARP4Q71RC2 SNRPB-203ENST00000474384 985 ntTSL 516.96■□□□□ 0.311e-15■■■■□ 23.3
LARP4Q71RC2 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -01e-15■■■■□ 23.3
LARP4Q71RC2 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -01e-15■■■■□ 23.3
LARP4Q71RC2 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.57■□□□□ 0.888e-8■■■■□ 23.2
LARP4Q71RC2 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.34■□□□□ 0.218e-8■■■■□ 23.2
LARP4Q71RC2 JPT1-208ENST00000481647 576 ntTSL 5 BASIC11.76□□□□□ -0.538e-8■■■■□ 23.2
LARP4Q71RC2 JPT1-205ENST00000470924 663 ntTSL 5 BASIC11.1□□□□□ -0.638e-8■■■■□ 23.2
LARP4Q71RC2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.511e-11■■■■□ 23.2
LARP4Q71RC2 TADA3-205ENST00000492103 1868 ntTSL 212.23□□□□□ -0.451e-11■■■■□ 23.2
LARP4Q71RC2 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.084e-8■■■■□ 23.2
LARP4Q71RC2 JPT1-207ENST00000481094 382 ntTSL 513.57□□□□□ -0.241e-7■■■■□ 23.2
LARP4Q71RC2 HBE1-201ENST00000292896 827 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.897e-24■■■■□ 23.2
LARP4Q71RC2 DSCR4-201ENST00000328264 1098 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.721e-7■■■■□ 23.2
LARP4Q71RC2 DSCR4-202ENST00000398948 777 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.161e-7■■■■□ 23.2
LARP4Q71RC2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.348e-9■■■■□ 23.2
LARP4Q71RC2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.178e-9■■■■□ 23.2
LARP4Q71RC2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.468e-9■■■■□ 23.2
LARP4Q71RC2 FKBP8-211ENST00000601844 1548 ntTSL 516.2■□□□□ 0.188e-9■■■■□ 23.2
LARP4Q71RC2 FKBP8-202ENST00000544835 1292 ntTSL 1 (best)16.2■□□□□ 0.188e-9■■■■□ 23.2
LARP4Q71RC2 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.118e-9■■■■□ 23.2
LARP4Q71RC2 RBM6-202ENST00000419610 2128 ntTSL 220.29■□□□□ 0.845e-6■■■■□ 23.2
LARP4Q71RC2 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.82■□□□□ 0.765e-6■■■■□ 23.2
LARP4Q71RC2 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.9■□□□□ 0.35e-6■■■■□ 23.2
LARP4Q71RC2 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.125e-6■■■■□ 23.2
LARP4Q71RC2 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.88□□□□□ -0.195e-6■■■■□ 23.2
LARP4Q71RC2 RBM6-213ENST00000454079 4324 ntTSL 211.63□□□□□ -0.555e-6■■■■□ 23.2
LARP4Q71RC2 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.195e-6■■■■□ 23.2
LARP4Q71RC2 HERC4-209ENST00000473533 3593 ntTSL 1 (best)6.14□□□□□ -1.435e-6■■■■□ 23.2
LARP4Q71RC2 RBM6-207ENST00000434592 2342 ntTSL 26.09□□□□□ -1.435e-6■■■■□ 23.2
LARP4Q71RC2 HERC4-206ENST00000427635 6391 ntTSL 25.47□□□□□ -1.535e-6■■■■□ 23.2
LARP4Q71RC2 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.542e-6■■■■□ 23.2
LARP4Q71RC2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.91□□□□□ -1.625e-6■■■■□ 23.2
LARP4Q71RC2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.69□□□□□ -1.665e-6■■■■□ 23.2
LARP4Q71RC2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.835e-6■■■■□ 23.2
LARP4Q71RC2 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.69□□□□□ -1.985e-6■■■■□ 23.2
LARP4Q71RC2 AHSA1-206ENST00000555457 641 ntTSL 314.95□□□□□ -0.027e-9■■■■□ 23.1
LARP4Q71RC2 AHSA1-209ENST00000555729 621 ntTSL 314.95□□□□□ -0.027e-9■■■■□ 23.1
LARP4Q71RC2 AHSA1-213ENST00000557476 584 ntTSL 314.95□□□□□ -0.027e-9■■■■□ 23.1
LARP4Q71RC2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.047e-9■■■■□ 23.1
LARP4Q71RC2 AHSA1-210ENST00000556369 849 ntTSL 510.89□□□□□ -0.677e-9■■■■□ 23.1
LARP4Q71RC2 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.11■□□□□ 0.336e-8■■■■□ 23.1
LARP4Q71RC2 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.043e-11■■■■□ 23.1
LARP4Q71RC2 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.79□□□□□ -0.043e-11■■■■□ 23.1
LARP4Q71RC2 PSMB6-204ENST00000575643 666 ntTSL 212.03□□□□□ -0.483e-11■■■■□ 23.1
LARP4Q71RC2 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.241e-11■■■■□ 23.1
LARP4Q71RC2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.071e-11■■■■□ 23.1
LARP4Q71RC2 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.34■□□□□ 0.851e-11■■■■□ 23.1
LARP4Q71RC2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.92■□□□□ 0.781e-11■■■■□ 23.1
LARP4Q71RC2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.34■□□□□ 0.211e-11■■■■□ 23.1
LARP4Q71RC2 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.2■□□□□ 0.021e-11■■■■□ 23.1
LARP4Q71RC2 GNB2-211ENST00000469287 1702 ntTSL 214.8□□□□□ -0.041e-11■■■■□ 23.1
LARP4Q71RC2 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.051e-11■■■■□ 23.1
LARP4Q71RC2 MIR20A-201ENST00000362279 71 ntBASIC0.53□□□□□ -2.321e-9■■■■□ 23.1
LARP4Q71RC2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.722e-11■■■■□ 23
LARP4Q71RC2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.722e-11■■■■□ 23
LARP4Q71RC2 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.722e-11■■■■□ 23
LARP4Q71RC2 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.335e-6■■■■□ 23
LARP4Q71RC2 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.12■□□□□ 0.332e-11■■■■□ 23
LARP4Q71RC2 NSMF-207ENST00000371482 2888 ntTSL 1 (best)16.24■□□□□ 0.192e-11■■■■□ 23
LARP4Q71RC2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.182e-11■■■■□ 23
LARP4Q71RC2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.182e-11■■■■□ 23
LARP4Q71RC2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.82□□□□□ -0.045e-6■■■■□ 23
LARP4Q71RC2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.045e-6■■■■□ 23
LARP4Q71RC2 TIMP2-205ENST00000592761 2433 ntTSL 1 (best)13.53□□□□□ -0.245e-6■■■■□ 23
LARP4Q71RC2 AIG1-203ENST00000367596 559 ntTSL 2 BASIC11.95□□□□□ -0.55e-6■■■■□ 23
LARP4Q71RC2 FUOM-206ENST00000478895 445 ntTSL 311.64□□□□□ -0.555e-6■■■■□ 23
LARP4Q71RC2 AIG1-204ENST00000367601 727 ntTSL 510.93□□□□□ -0.665e-6■■■■□ 23
LARP4Q71RC2 AIG1-205ENST00000447498 444 ntTSL 510.92□□□□□ -0.665e-6■■■■□ 23
LARP4Q71RC2 TIMP2-204ENST00000586057 3389 ntTSL 1 (best) BASIC9.99□□□□□ -0.815e-6■■■■□ 23
LARP4Q71RC2 TTF1-203ENST00000612514 1780 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.855e-6■■■■□ 23
LARP4Q71RC2 TIMP2-202ENST00000536189 3415 ntTSL 2 BASIC9.33□□□□□ -0.925e-6■■■■□ 23
LARP4Q71RC2 TIMP2-203ENST00000585421 3345 ntTSL 3 BASIC9.12□□□□□ -0.955e-6■■■■□ 23
LARP4Q71RC2 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC8.8□□□□□ -16e-6■■■■□ 23
LARP4Q71RC2 TTF1-201ENST00000334270 3052 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.095e-6■■■■□ 23
LARP4Q71RC2 AIG1-201ENST00000275235 1202 ntTSL 2 BASIC8.2□□□□□ -1.15e-6■■■■□ 23
LARP4Q71RC2 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC6.68□□□□□ -1.345e-6■■■■□ 23
LARP4Q71RC2 TTF1-202ENST00000461970 581 ntTSL 26.59□□□□□ -1.355e-6■■■■□ 23
LARP4Q71RC2 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.22□□□□□ -1.575e-6■■■■□ 23
LARP4Q71RC2 RPS15AP1-201ENST00000457423 391 ntBASIC5.01□□□□□ -1.616e-6■■■■□ 23
LARP4Q71RC2 APOC1-208ENST00000592535 430 ntTSL 1 (best)12.66□□□□□ -0.384e-11■■■■□ 23
LARP4Q71RC2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.83■□□□□ 0.441e-6■■■■□ 23
LARP4Q71RC2 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.021e-6■■■■□ 23
LARP4Q71RC2 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.82□□□□□ -0.21e-6■■■■□ 23
LARP4Q71RC2 ALAS2-208ENST00000498636 959 ntTSL 312.43□□□□□ -0.421e-6■■■■□ 23
LARP4Q71RC2 UQCR10-202ENST00000401406 584 ntTSL 1 (best) BASIC9.2□□□□□ -0.942e-9■■■■□ 23
LARP4Q71RC2 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.292e-9■■■■□ 23
LARP4Q71RC2 IL32-216ENST00000529699 672 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.926e-17■■■■□ 23
LARP4Q71RC2 IL32-225ENST00000548246 447 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.926e-17■■■■□ 23
LARP4Q71RC2 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.567e-7■■■■□ 22.9
LARP4Q71RC2 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.257e-7■■■■□ 22.9
LARP4Q71RC2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.97■□□□□ 0.797e-7■■■■□ 22.9
LARP4Q71RC2 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.742e-10■■■■□ 22.9
LARP4Q71RC2 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.697e-7■■■■□ 22.9
Retrieved 100 of 15,922 protein–RNA pairs in 154.4 ms