RNA–Protein interactions for RNA: ENST00000334270.2

TTF1-201, Transcript of transcription termination factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTF1, Length 3,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTF1-201ENST00000334270 AEBP2Q6ZN18 517 aaPredicted RBP22■■□□□ 1.11
TTF1-201ENST00000334270 CHIC1Q5VXU3 224 aa21.76■■□□□ 1.07
TTF1-201ENST00000334270 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
TTF1-201ENST00000334270 NISCHQ9Y2I1 1504 aa19.42■□□□□ 0.7
TTF1-201ENST00000334270 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
TTF1-201ENST00000334270 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
TTF1-201ENST00000334270 ADRA2BP18089 450 aa17.64■□□□□ 0.41
TTF1-201ENST00000334270 CCDC180Q9P1Z9 1646 aa17.42■□□□□ 0.38
TTF1-201ENST00000334270 EHMT2Q96KQ7 1210 aa17.37■□□□□ 0.37
TTF1-201ENST00000334270 PPP6R1Q9UPN7 881 aa17.33■□□□□ 0.37
TTF1-201ENST00000334270 KCNA4P22459 653 aa17.17■□□□□ 0.34
TTF1-201ENST00000334270 FOXD1Q16676 465 aa16.95■□□□□ 0.3
TTF1-201ENST00000334270 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
TTF1-201ENST00000334270 ZCCHC6Q5VYS8 1495 aaKnown RBP16.46■□□□□ 0.23
TTF1-201ENST00000334270 MYO15BQ96JP2 1530 aa16.39■□□□□ 0.21
TTF1-201ENST00000334270 CSRNP3Q8WYN3 585 aa16.37■□□□□ 0.21
TTF1-201ENST00000334270 PIAS4Q8N2W9 510 aaPredicted RBP16.19■□□□□ 0.18
TTF1-201ENST00000334270 SLC4A1APQ9BWU0 796 aaKnown RBP16.19■□□□□ 0.18
TTF1-201ENST00000334270 PPP4R3CPQ6ZMV5 832 aa16.17■□□□□ 0.18
TTF1-201ENST00000334270 ZBTB22O15209 634 aa15.94■□□□□ 0.14
TTF1-201ENST00000334270 NACADO15069 1562 aa15.92■□□□□ 0.14
TTF1-201ENST00000334270 NPM3O75607 178 aaKnown RBP15.88■□□□□ 0.13
TTF1-201ENST00000334270 RB1CC1Q8TDY2 1594 aa15.63■□□□□ 0.09
TTF1-201ENST00000334270 MAPK8IP2Q13387 824 aaPredicted RBP15.61■□□□□ 0.09
TTF1-201ENST00000334270 NCBP3Q53F19 620 aaKnown RBP15.51■□□□□ 0.07
TTF1-201ENST00000334270 ABCC9O60706 1549 aa15.5■□□□□ 0.07
TTF1-201ENST00000334270 SHROOM4Q9ULL8 1493 aa15.5■□□□□ 0.07
TTF1-201ENST00000334270 UNC13AQ9UPW8 1703 aa15.48■□□□□ 0.07
TTF1-201ENST00000334270 SCRIBQ14160 1630 aa15.26■□□□□ 0.03
TTF1-201ENST00000334270 RTN4Q9NQC3 1192 aaKnown RBP15.23■□□□□ 0.03
TTF1-201ENST00000334270 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
TTF1-201ENST00000334270 BICRAQ9NZM4 1560 aa15.15■□□□□ 0.02
TTF1-201ENST00000334270 PEG3Q9GZU2 1588 aa15.12■□□□□ 0.01
TTF1-201ENST00000334270 BAZ1AQ9NRL2 1556 aaPredicted RBP15.05■□□□□ 0
TTF1-201ENST00000334270 FOXD4L1Q9NU39 408 aa15.04■□□□□ -0
TTF1-201ENST00000334270 SMARCA4P51532 1647 aa14.98□□□□□ -0.01
TTF1-201ENST00000334270 SCAF1Q9H7N4 1312 aaKnown RBP14.91□□□□□ -0.02
TTF1-201ENST00000334270 RSF1Q96T23 1441 aaPredicted RBP14.9□□□□□ -0.02
TTF1-201ENST00000334270 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
TTF1-201ENST00000334270 SMARCA2P51531 1590 aa14.87□□□□□ -0.03
TTF1-201ENST00000334270 EIF4G1Q04637 1599 aaKnown RBP14.87□□□□□ -0.03
TTF1-201ENST00000334270 TOP2AP11388 1531 aaKnown RBP14.85□□□□□ -0.03
TTF1-201ENST00000334270 SLC24A1O60721 1099 aa14.84□□□□□ -0.03
TTF1-201ENST00000334270 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
TTF1-201ENST00000334270 FKBP8Q14318 412 aa14.79□□□□□ -0.04
TTF1-201ENST00000334270 WIZO95785 1651 aa14.74□□□□□ -0.05
TTF1-201ENST00000334270 HMGXB3Q12766 1538 aa14.73□□□□□ -0.05
TTF1-201ENST00000334270 CECR2Q9BXF3 1484 aa14.71□□□□□ -0.06
TTF1-201ENST00000334270 PRDM2Q13029 1718 aa14.7□□□□□ -0.06
TTF1-201ENST00000334270 RNF216Q9NWF9 866 aaPredicted RBP14.67□□□□□ -0.06
TTF1-201ENST00000334270 MSH5O43196 834 aa14.65□□□□□ -0.06
TTF1-201ENST00000334270 DCAF8L2P0C7V8 631 aa14.61□□□□□ -0.07
TTF1-201ENST00000334270 ATF5Q9Y2D1 282 aaPredicted RBP14.57□□□□□ -0.08
TTF1-201ENST00000334270 NCAPD3P42695 1498 aa14.52□□□□□ -0.09
TTF1-201ENST00000334270 ATAD2BQ9ULI0 1458 aa14.52□□□□□ -0.09
TTF1-201ENST00000334270 AMER1Q5JTC6 1135 aaPredicted RBP14.45□□□□□ -0.1
TTF1-201ENST00000334270 DCAF8L1A6NGE4 600 aa14.45□□□□□ -0.1
TTF1-201ENST00000334270 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
TTF1-201ENST00000334270 HOXD11P31277 338 aaPredicted RBP14.4□□□□□ -0.1
TTF1-201ENST00000334270 CCDC88BA6NC98 1476 aa14.38□□□□□ -0.11
TTF1-201ENST00000334270 BIVM-ERCC5R4GMW8 1640 aa14.36□□□□□ -0.11
TTF1-201ENST00000334270 BAZ1BQ9UIG0 1483 aaKnown RBP14.36□□□□□ -0.11
TTF1-201ENST00000334270 MYCNP04198 464 aaPredicted RBP14.27□□□□□ -0.13
TTF1-201ENST00000334270 SUPT5HO00267 1087 aaKnown RBP14.26□□□□□ -0.13
TTF1-201ENST00000334270 CC2D2AQ9P2K1 1620 aa14.25□□□□□ -0.13
TTF1-201ENST00000334270 DNAJC5BQ9UF47 199 aa14.24□□□□□ -0.13
TTF1-201ENST00000334270 TOP2BQ02880 1626 aa14.2□□□□□ -0.14
TTF1-201ENST00000334270 CFTRP13569 1480 aa14.18□□□□□ -0.14
TTF1-201ENST00000334270 EEA1Q15075 1411 aa14.17□□□□□ -0.14
TTF1-201ENST00000334270 LAMC3Q9Y6N6 1575 aa14.13□□□□□ -0.15
TTF1-201ENST00000334270 KIF21BO75037 1637 aa14.08□□□□□ -0.16
TTF1-201ENST00000334270 WDR97A6NE52 1622 aa14.06□□□□□ -0.16
TTF1-201ENST00000334270 PABPN1Q86U42 306 aaKnown RBP eCLIP14.06□□□□□ -0.16
TTF1-201ENST00000334270 SYNJ1O43426 1573 aa14.05□□□□□ -0.16
TTF1-201ENST00000334270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.05□□□□□ -0.16
TTF1-201ENST00000334270 U3KPZ7 1027 aaPredicted RBP14□□□□□ -0.17
TTF1-201ENST00000334270 ABCC8Q09428 1581 aa13.97□□□□□ -0.17
TTF1-201ENST00000334270 WRNQ14191 1432 aaPredicted RBP eCLIP13.96□□□□□ -0.18
TTF1-201ENST00000334270 ERICH3Q5RHP9 1530 aa13.96□□□□□ -0.18
TTF1-201ENST00000334270 DNMBPQ6XZF7 1577 aa13.95□□□□□ -0.18
TTF1-201ENST00000334270 ATXN8OSP0DMR3 200 aa13.95□□□□□ -0.18
TTF1-201ENST00000334270 CUX1P39880 1505 aa13.92□□□□□ -0.18
TTF1-201ENST00000334270 CADPSQ9ULU8 1353 aa13.91□□□□□ -0.18
TTF1-201ENST00000334270 PRKCSHP14314 528 aaPredicted RBP13.89□□□□□ -0.19
TTF1-201ENST00000334270 CUL7Q14999 1698 aa13.83□□□□□ -0.19
TTF1-201ENST00000334270 KIF21AQ7Z4S6 1674 aa13.8□□□□□ -0.2
TTF1-201ENST00000334270 ABCA5Q8WWZ7 1642 aa13.79□□□□□ -0.2
TTF1-201ENST00000334270 CEP164Q9UPV0 1460 aa13.77□□□□□ -0.2
TTF1-201ENST00000334270 ABCA10Q8WWZ4 1543 aa13.77□□□□□ -0.21
TTF1-201ENST00000334270 MKRN4PQ13434 485 aaPredicted RBP13.76□□□□□ -0.21
TTF1-201ENST00000334270 FANCD2Q9BXW9 1451 aa13.75□□□□□ -0.21
TTF1-201ENST00000334270 GOLGA3Q08378 1498 aa13.75□□□□□ -0.21
TTF1-201ENST00000334270 PRXQ9BXM0 1461 aa13.75□□□□□ -0.21
TTF1-201ENST00000334270 WDR62O43379 1518 aa13.74□□□□□ -0.21
TTF1-201ENST00000334270 TARBP1Q13395 1621 aaKnown RBP13.73□□□□□ -0.21
TTF1-201ENST00000334270 TOPBP1Q92547 1522 aa13.71□□□□□ -0.21
TTF1-201ENST00000334270 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
TTF1-201ENST00000334270 TNIKQ9UKE5 1360 aa13.71□□□□□ -0.21
TTF1-201ENST00000334270 TRIM41Q8WV44 630 aa13.71□□□□□ -0.22
TTF1-201ENST00000334270 CTTNBP2Q8WZ74 1663 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms