Protein–RNA interactions for Protein: Q5T5M9

CCNJ, Cyclin-J, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNJQ5T5M9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CCNJQ5T5M9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.58■□□□□ 0.89
CCNJQ5T5M9 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.58■□□□□ 0.89
CCNJQ5T5M9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CCNJQ5T5M9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.58■□□□□ 0.88
CCNJQ5T5M9 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CCNJQ5T5M9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNJQ5T5M9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNJQ5T5M9 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNJQ5T5M9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNJQ5T5M9 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNJQ5T5M9 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNJQ5T5M9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CCNJQ5T5M9 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.57■□□□□ 0.88
CCNJQ5T5M9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNJQ5T5M9 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNJQ5T5M9 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCNJQ5T5M9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.57■□□□□ 0.88
CCNJQ5T5M9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCNJQ5T5M9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 DUX4L4-201ENST00000566884 1269 ntBASIC20.56■□□□□ 0.88
CCNJQ5T5M9 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
CCNJQ5T5M9 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CCNJQ5T5M9 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNJQ5T5M9 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
CCNJQ5T5M9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNJQ5T5M9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCNJQ5T5M9 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNJQ5T5M9 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCNJQ5T5M9 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.55■□□□□ 0.88
CCNJQ5T5M9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCNJQ5T5M9 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.55■□□□□ 0.88
CCNJQ5T5M9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.55■□□□□ 0.88
CCNJQ5T5M9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CCNJQ5T5M9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCNJQ5T5M9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCNJQ5T5M9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCNJQ5T5M9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCNJQ5T5M9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCNJQ5T5M9 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.52■□□□□ 0.88
CCNJQ5T5M9 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.52■□□□□ 0.88
CCNJQ5T5M9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CCNJQ5T5M9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCNJQ5T5M9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCNJQ5T5M9 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.52■□□□□ 0.88
CCNJQ5T5M9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
CCNJQ5T5M9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
CCNJQ5T5M9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCNJQ5T5M9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCNJQ5T5M9 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCNJQ5T5M9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCNJQ5T5M9 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms