Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXCR4P61073 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
CXCR4P61073 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXCR4P61073 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CXCR4P61073 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CXCR4P61073 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.18■□□□□ 0.82
CXCR4P61073 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
CXCR4P61073 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXCR4P61073 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.17■□□□□ 0.82
CXCR4P61073 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXCR4P61073 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CXCR4P61073 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.17■□□□□ 0.82
CXCR4P61073 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXCR4P61073 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CXCR4P61073 LONRF2P2-201ENST00000439212 571 ntBASIC20.17■□□□□ 0.82
CXCR4P61073 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
CXCR4P61073 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CXCR4P61073 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CXCR4P61073 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CXCR4P61073 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CXCR4P61073 AL353803.4-201ENST00000565882 1934 ntBASIC20.16■□□□□ 0.82
CXCR4P61073 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.16■□□□□ 0.82
CXCR4P61073 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXCR4P61073 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CXCR4P61073 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXCR4P61073 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CXCR4P61073 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CXCR4P61073 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CXCR4P61073 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXCR4P61073 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXCR4P61073 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CXCR4P61073 AC010542.4-201ENST00000563151 1910 ntBASIC20.15■□□□□ 0.82
CXCR4P61073 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CXCR4P61073 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.15■□□□□ 0.82
CXCR4P61073 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CXCR4P61073 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CXCR4P61073 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.15■□□□□ 0.82
CXCR4P61073 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CXCR4P61073 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXCR4P61073 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.15■□□□□ 0.82
CXCR4P61073 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.15■□□□□ 0.82
CXCR4P61073 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.15■□□□□ 0.82
CXCR4P61073 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.15■□□□□ 0.82
CXCR4P61073 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CXCR4P61073 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CXCR4P61073 AC073130.3-201ENST00000624389 2278 ntBASIC20.15■□□□□ 0.82
CXCR4P61073 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
CXCR4P61073 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CXCR4P61073 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CXCR4P61073 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CXCR4P61073 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.14■□□□□ 0.81
CXCR4P61073 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CXCR4P61073 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CXCR4P61073 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CXCR4P61073 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CXCR4P61073 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CXCR4P61073 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CXCR4P61073 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
CXCR4P61073 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CXCR4P61073 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CXCR4P61073 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CXCR4P61073 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CXCR4P61073 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.13■□□□□ 0.81
CXCR4P61073 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.13■□□□□ 0.81
CXCR4P61073 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CXCR4P61073 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.13■□□□□ 0.81
CXCR4P61073 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.13■□□□□ 0.81
CXCR4P61073 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CXCR4P61073 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CXCR4P61073 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CXCR4P61073 AL121603.2-201ENST00000557373 2117 ntBASIC20.12■□□□□ 0.81
CXCR4P61073 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.12■□□□□ 0.81
CXCR4P61073 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CXCR4P61073 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
CXCR4P61073 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CXCR4P61073 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CXCR4P61073 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
CXCR4P61073 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CXCR4P61073 RARRES2P2-201ENST00000394842 485 ntBASIC20.12■□□□□ 0.81
CXCR4P61073 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.12■□□□□ 0.81
CXCR4P61073 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
CXCR4P61073 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.12■□□□□ 0.81
CXCR4P61073 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CXCR4P61073 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
CXCR4P61073 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
CXCR4P61073 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CXCR4P61073 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CXCR4P61073 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CXCR4P61073 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.11■□□□□ 0.81
CXCR4P61073 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CXCR4P61073 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CXCR4P61073 AC011551.1-201ENST00000614101 683 ntBASIC20.11■□□□□ 0.81
CXCR4P61073 U85056.1-201ENST00000616429 682 ntBASIC20.11■□□□□ 0.81
CXCR4P61073 AC129492.7-201ENST00000622992 756 ntBASIC20.11■□□□□ 0.81
CXCR4P61073 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CXCR4P61073 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CXCR4P61073 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CXCR4P61073 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.1■□□□□ 0.81
CXCR4P61073 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.1■□□□□ 0.81
CXCR4P61073 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms