Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RAB5BP61020 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB5BP61020 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5BP61020 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB5BP61020 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5BP61020 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5BP61020 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB5BP61020 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5BP61020 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB5BP61020 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5BP61020 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5BP61020 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5BP61020 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB5BP61020 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
RAB5BP61020 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.39■□□□□ 0.38
RAB5BP61020 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5BP61020 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RAB5BP61020 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RAB5BP61020 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5BP61020 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
RAB5BP61020 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5BP61020 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5BP61020 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5BP61020 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5BP61020 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5BP61020 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
RAB5BP61020 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RAB5BP61020 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB5BP61020 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB5BP61020 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB5BP61020 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5BP61020 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5BP61020 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5BP61020 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5BP61020 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RAB5BP61020 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.38■□□□□ 0.37
RAB5BP61020 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5BP61020 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB5BP61020 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
RAB5BP61020 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5BP61020 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5BP61020 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.38■□□□□ 0.37
RAB5BP61020 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5BP61020 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RAB5BP61020 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RAB5BP61020 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RAB5BP61020 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RAB5BP61020 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.37■□□□□ 0.37
RAB5BP61020 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB5BP61020 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB5BP61020 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB5BP61020 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB5BP61020 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RAB5BP61020 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB5BP61020 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC17.37■□□□□ 0.37
RAB5BP61020 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB5BP61020 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.37■□□□□ 0.37
RAB5BP61020 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RAB5BP61020 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB5BP61020 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
RAB5BP61020 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RAB5BP61020 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB5BP61020 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RAB5BP61020 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5BP61020 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5BP61020 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RAB5BP61020 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5BP61020 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5BP61020 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5BP61020 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5BP61020 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
RAB5BP61020 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.36■□□□□ 0.37
RAB5BP61020 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5BP61020 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5BP61020 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RAB5BP61020 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5BP61020 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5BP61020 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5BP61020 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5BP61020 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB5BP61020 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5BP61020 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
RAB5BP61020 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5BP61020 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5BP61020 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5BP61020 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB5BP61020 KLF16-203ENST00000592313 508 ntTSL 3 BASIC17.35■□□□□ 0.37
RAB5BP61020 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5BP61020 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5BP61020 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB5BP61020 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB5BP61020 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RAB5BP61020 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
RAB5BP61020 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
RAB5BP61020 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB5BP61020 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.35■□□□□ 0.37
RAB5BP61020 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
RAB5BP61020 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
RAB5BP61020 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
RAB5BP61020 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms