Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
ACKR3P25106 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.18■□□□□ 0.66
ACKR3P25106 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ACKR3P25106 AL035685.1-201ENST00000636663 812 ntBASIC19.18■□□□□ 0.66
ACKR3P25106 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ACKR3P25106 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.18■□□□□ 0.66
ACKR3P25106 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ACKR3P25106 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.18■□□□□ 0.66
ACKR3P25106 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACKR3P25106 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACKR3P25106 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACKR3P25106 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ACKR3P25106 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACKR3P25106 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ACKR3P25106 LINC01529-204ENST00000636474 1715 ntBASIC19.17■□□□□ 0.66
ACKR3P25106 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ACKR3P25106 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
ACKR3P25106 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACKR3P25106 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.17■□□□□ 0.66
ACKR3P25106 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.17■□□□□ 0.66
ACKR3P25106 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACKR3P25106 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ACKR3P25106 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.17■□□□□ 0.66
ACKR3P25106 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACKR3P25106 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACKR3P25106 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACKR3P25106 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
ACKR3P25106 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACKR3P25106 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACKR3P25106 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
ACKR3P25106 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.16■□□□□ 0.66
ACKR3P25106 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
ACKR3P25106 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.16■□□□□ 0.66
ACKR3P25106 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.16■□□□□ 0.66
ACKR3P25106 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACKR3P25106 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACKR3P25106 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
ACKR3P25106 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACKR3P25106 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACKR3P25106 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACKR3P25106 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACKR3P25106 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
ACKR3P25106 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ACKR3P25106 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.15■□□□□ 0.66
ACKR3P25106 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.15■□□□□ 0.66
ACKR3P25106 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
ACKR3P25106 EP400NL-214ENST00000641289 2402 ntBASIC19.15■□□□□ 0.66
ACKR3P25106 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
ACKR3P25106 FP325331.1-202ENST00000623531 1380 ntBASIC19.15■□□□□ 0.66
ACKR3P25106 GUSBP5-202ENST00000510805 1989 ntBASIC19.15■□□□□ 0.66
ACKR3P25106 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
ACKR3P25106 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
ACKR3P25106 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.14■□□□□ 0.66
ACKR3P25106 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
ACKR3P25106 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
ACKR3P25106 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ACKR3P25106 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ACKR3P25106 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ACKR3P25106 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ACKR3P25106 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
ACKR3P25106 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
ACKR3P25106 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
ACKR3P25106 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
ACKR3P25106 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.14■□□□□ 0.65
ACKR3P25106 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
ACKR3P25106 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.14■□□□□ 0.65
ACKR3P25106 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.13■□□□□ 0.65
ACKR3P25106 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACKR3P25106 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
ACKR3P25106 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACKR3P25106 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ACKR3P25106 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.13■□□□□ 0.65
ACKR3P25106 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACKR3P25106 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
ACKR3P25106 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
ACKR3P25106 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ACKR3P25106 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACKR3P25106 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.12■□□□□ 0.65
ACKR3P25106 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ACKR3P25106 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACKR3P25106 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACKR3P25106 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACKR3P25106 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ACKR3P25106 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.12■□□□□ 0.65
ACKR3P25106 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.12■□□□□ 0.65
ACKR3P25106 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
ACKR3P25106 MIR6724-1-201ENST00000616420 92 ntBASIC19.12■□□□□ 0.65
ACKR3P25106 MIR6724-2-201ENST00000616483 92 ntBASIC19.12■□□□□ 0.65
ACKR3P25106 MIR6724-4-201ENST00000617390 92 ntBASIC19.12■□□□□ 0.65
ACKR3P25106 MIR6724-3-201ENST00000622482 92 ntBASIC19.12■□□□□ 0.65
ACKR3P25106 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACKR3P25106 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
ACKR3P25106 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ACKR3P25106 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.12■□□□□ 0.65
ACKR3P25106 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ACKR3P25106 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ACKR3P25106 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ACKR3P25106 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ACKR3P25106 C17orf82-201ENST00000623772 1530 ntBASIC19.11■□□□□ 0.65
ACKR3P25106 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms