Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PF4V1P10720 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PF4V1P10720 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PF4V1P10720 THRA-202ENST00000394121 2260 ntTSL 2 BASIC17.47■□□□□ 0.39
PF4V1P10720 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PF4V1P10720 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PF4V1P10720 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PF4V1P10720 CA15P2-201ENST00000611168 834 ntBASIC17.47■□□□□ 0.39
PF4V1P10720 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC17.47■□□□□ 0.39
PF4V1P10720 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
PF4V1P10720 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.47■□□□□ 0.39
PF4V1P10720 FP325331.1-202ENST00000623531 1380 ntBASIC17.47■□□□□ 0.39
PF4V1P10720 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PF4V1P10720 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PF4V1P10720 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PF4V1P10720 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PF4V1P10720 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.47■□□□□ 0.39
PF4V1P10720 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.47■□□□□ 0.39
PF4V1P10720 LINC01529-204ENST00000636474 1715 ntBASIC17.47■□□□□ 0.39
PF4V1P10720 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PF4V1P10720 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.46■□□□□ 0.39
PF4V1P10720 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.46■□□□□ 0.39
PF4V1P10720 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PF4V1P10720 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PF4V1P10720 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PF4V1P10720 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.46■□□□□ 0.39
PF4V1P10720 AC006455.2-201ENST00000429931 906 ntBASIC17.46■□□□□ 0.39
PF4V1P10720 RBM38-205ENST00000440234 686 ntTSL 2 BASIC17.46■□□□□ 0.39
PF4V1P10720 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC17.46■□□□□ 0.39
PF4V1P10720 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.46■□□□□ 0.39
PF4V1P10720 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.46■□□□□ 0.39
PF4V1P10720 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.46■□□□□ 0.39
PF4V1P10720 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PF4V1P10720 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PF4V1P10720 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PF4V1P10720 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
PF4V1P10720 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PF4V1P10720 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PF4V1P10720 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PF4V1P10720 AC092666.2-201ENST00000613287 246 ntBASIC17.45■□□□□ 0.38
PF4V1P10720 AC136469.2-201ENST00000623944 1028 ntBASIC17.45■□□□□ 0.38
PF4V1P10720 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PF4V1P10720 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.45■□□□□ 0.38
PF4V1P10720 ANOS2P-203ENST00000472227 1816 ntBASIC17.44■□□□□ 0.38
PF4V1P10720 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PF4V1P10720 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PF4V1P10720 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
PF4V1P10720 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PF4V1P10720 AC099791.1-201ENST00000416440 715 ntBASIC17.44■□□□□ 0.38
PF4V1P10720 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PF4V1P10720 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.44■□□□□ 0.38
PF4V1P10720 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.44■□□□□ 0.38
PF4V1P10720 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.44■□□□□ 0.38
PF4V1P10720 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.44■□□□□ 0.38
PF4V1P10720 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PF4V1P10720 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PF4V1P10720 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PF4V1P10720 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PF4V1P10720 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.44■□□□□ 0.38
PF4V1P10720 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PF4V1P10720 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC17.44■□□□□ 0.38
PF4V1P10720 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
PF4V1P10720 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
PF4V1P10720 PKD1P6-201ENST00000343738 4769 ntBASIC17.43■□□□□ 0.38
PF4V1P10720 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PF4V1P10720 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PF4V1P10720 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PF4V1P10720 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.43■□□□□ 0.38
PF4V1P10720 pRNA.6-201ENST00000610482 90 ntBASIC17.43■□□□□ 0.38
PF4V1P10720 pRNA.5-201ENST00000612139 90 ntBASIC17.43■□□□□ 0.38
PF4V1P10720 pRNA.11-201ENST00000618423 90 ntBASIC17.43■□□□□ 0.38
PF4V1P10720 pRNA.13-201ENST00000619112 90 ntBASIC17.43■□□□□ 0.38
PF4V1P10720 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PF4V1P10720 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PF4V1P10720 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PF4V1P10720 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PF4V1P10720 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PF4V1P10720 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.42■□□□□ 0.38
PF4V1P10720 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC17.42■□□□□ 0.38
PF4V1P10720 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PF4V1P10720 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PF4V1P10720 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
PF4V1P10720 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PF4V1P10720 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
PF4V1P10720 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.42■□□□□ 0.38
PF4V1P10720 DUX4L4-201ENST00000566884 1269 ntBASIC17.42■□□□□ 0.38
PF4V1P10720 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PF4V1P10720 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.42■□□□□ 0.38
PF4V1P10720 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PF4V1P10720 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PF4V1P10720 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.41■□□□□ 0.38
PF4V1P10720 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.41■□□□□ 0.38
PF4V1P10720 AL353803.4-201ENST00000565882 1934 ntBASIC17.41■□□□□ 0.38
PF4V1P10720 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PF4V1P10720 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC17.41■□□□□ 0.38
PF4V1P10720 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PF4V1P10720 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.41■□□□□ 0.38
PF4V1P10720 AC026271.2-201ENST00000428091 497 ntBASIC17.41■□□□□ 0.38
PF4V1P10720 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PF4V1P10720 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms