Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LCATP04180 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCATP04180 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LCATP04180 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
LCATP04180 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.3■□□□□ 0.68
LCATP04180 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCATP04180 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LCATP04180 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.3■□□□□ 0.68
LCATP04180 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.3■□□□□ 0.68
LCATP04180 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCATP04180 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCATP04180 AL356740.2-201ENST00000601559 647 ntBASIC19.3■□□□□ 0.68
LCATP04180 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.3■□□□□ 0.68
LCATP04180 AL117332.1-201ENST00000622628 974 ntBASIC19.3■□□□□ 0.68
LCATP04180 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCATP04180 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.3■□□□□ 0.68
LCATP04180 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LCATP04180 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCATP04180 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCATP04180 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.29■□□□□ 0.68
LCATP04180 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCATP04180 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCATP04180 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
LCATP04180 C17orf82-201ENST00000623772 1530 ntBASIC19.29■□□□□ 0.68
LCATP04180 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCATP04180 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LCATP04180 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCATP04180 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.28■□□□□ 0.68
LCATP04180 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.28■□□□□ 0.68
LCATP04180 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCATP04180 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.28■□□□□ 0.68
LCATP04180 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCATP04180 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCATP04180 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.28■□□□□ 0.68
LCATP04180 DUX4L4-201ENST00000566884 1269 ntBASIC19.28■□□□□ 0.68
LCATP04180 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCATP04180 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.28■□□□□ 0.68
LCATP04180 AC233723.2-201ENST00000623798 2106 ntBASIC19.28■□□□□ 0.68
LCATP04180 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LCATP04180 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LCATP04180 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LCATP04180 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCATP04180 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LCATP04180 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCATP04180 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCATP04180 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LCATP04180 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LCATP04180 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCATP04180 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCATP04180 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LCATP04180 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LCATP04180 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
LCATP04180 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
LCATP04180 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.27■□□□□ 0.67
LCATP04180 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LCATP04180 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCATP04180 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCATP04180 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.26■□□□□ 0.67
LCATP04180 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LCATP04180 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LCATP04180 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCATP04180 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LCATP04180 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LCATP04180 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.25■□□□□ 0.67
LCATP04180 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.25■□□□□ 0.67
LCATP04180 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
LCATP04180 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCATP04180 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LCATP04180 AL356441.2-201ENST00000443009 864 ntBASIC19.25■□□□□ 0.67
LCATP04180 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
LCATP04180 AC009086.3-201ENST00000623486 1008 ntBASIC19.25■□□□□ 0.67
LCATP04180 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCATP04180 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LCATP04180 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LCATP04180 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCATP04180 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.25■□□□□ 0.67
LCATP04180 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.25■□□□□ 0.67
LCATP04180 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LCATP04180 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCATP04180 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCATP04180 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LCATP04180 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCATP04180 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCATP04180 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCATP04180 MIR3621-201ENST00000580529 85 ntBASIC19.24■□□□□ 0.67
LCATP04180 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCATP04180 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LCATP04180 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.24■□□□□ 0.67
LCATP04180 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LCATP04180 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCATP04180 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCATP04180 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCATP04180 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCATP04180 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LCATP04180 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCATP04180 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LCATP04180 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LCATP04180 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.23■□□□□ 0.67
LCATP04180 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LCATP04180 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms