Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HMGCRP04035 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HMGCRP04035 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC25.24■■□□□ 1.63
HMGCRP04035 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
HMGCRP04035 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC25.23■■□□□ 1.63
HMGCRP04035 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
HMGCRP04035 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.23■■□□□ 1.63
HMGCRP04035 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.23■■□□□ 1.63
HMGCRP04035 AP004607.4-201ENST00000530158 1459 ntBASIC25.23■■□□□ 1.63
HMGCRP04035 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC25.23■■□□□ 1.63
HMGCRP04035 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
HMGCRP04035 CROCCP5-201ENST00000436658 830 ntBASIC25.23■■□□□ 1.63
HMGCRP04035 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HMGCRP04035 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC25.23■■□□□ 1.63
HMGCRP04035 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.23■■□□□ 1.63
HMGCRP04035 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC25.23■■□□□ 1.63
HMGCRP04035 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
HMGCRP04035 AC004854.2-201ENST00000608450 1441 ntBASIC25.22■■□□□ 1.63
HMGCRP04035 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HMGCRP04035 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HMGCRP04035 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HMGCRP04035 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC25.22■■□□□ 1.63
HMGCRP04035 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC25.22■■□□□ 1.63
HMGCRP04035 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
HMGCRP04035 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
HMGCRP04035 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC25.22■■□□□ 1.63
HMGCRP04035 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.22■■□□□ 1.63
HMGCRP04035 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC25.22■■□□□ 1.63
HMGCRP04035 WWOX-218ENST00000627394 894 ntTSL 5 BASIC25.22■■□□□ 1.63
HMGCRP04035 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HMGCRP04035 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HMGCRP04035 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC25.22■■□□□ 1.63
HMGCRP04035 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
HMGCRP04035 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
HMGCRP04035 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
HMGCRP04035 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
HMGCRP04035 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC25.21■■□□□ 1.63
HMGCRP04035 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
HMGCRP04035 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
HMGCRP04035 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC25.2■■□□□ 1.62
HMGCRP04035 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
HMGCRP04035 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
HMGCRP04035 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC25.2■■□□□ 1.62
HMGCRP04035 TMEM191A-211ENST00000637163 1067 ntBASIC25.2■■□□□ 1.62
HMGCRP04035 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
HMGCRP04035 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
HMGCRP04035 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HMGCRP04035 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
HMGCRP04035 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
HMGCRP04035 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HMGCRP04035 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.19■■□□□ 1.62
HMGCRP04035 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HMGCRP04035 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HMGCRP04035 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
HMGCRP04035 NCF1B-203ENST00000435988 1254 ntBASIC25.19■■□□□ 1.62
HMGCRP04035 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC25.19■■□□□ 1.62
HMGCRP04035 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.19■■□□□ 1.62
HMGCRP04035 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HMGCRP04035 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
HMGCRP04035 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HMGCRP04035 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HMGCRP04035 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
HMGCRP04035 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.18■■□□□ 1.62
HMGCRP04035 METTL26-203ENST00000397664 604 ntTSL 2 BASIC25.18■■□□□ 1.62
HMGCRP04035 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
HMGCRP04035 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
HMGCRP04035 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
HMGCRP04035 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC25.18■■□□□ 1.62
HMGCRP04035 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HMGCRP04035 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
HMGCRP04035 AC020928.2-201ENST00000588717 2197 ntBASIC25.18■■□□□ 1.62
HMGCRP04035 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
HMGCRP04035 RARA-203ENST00000394086 2008 ntTSL 2 BASIC25.17■■□□□ 1.62
HMGCRP04035 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
HMGCRP04035 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC25.17■■□□□ 1.62
HMGCRP04035 KRT19P1-201ENST00000405746 1186 ntBASIC25.17■■□□□ 1.62
HMGCRP04035 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
HMGCRP04035 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
HMGCRP04035 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
HMGCRP04035 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
HMGCRP04035 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HMGCRP04035 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.16■■□□□ 1.62
HMGCRP04035 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC25.16■■□□□ 1.62
HMGCRP04035 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
HMGCRP04035 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
HMGCRP04035 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
HMGCRP04035 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC25.16■■□□□ 1.62
HMGCRP04035 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC25.16■■□□□ 1.62
HMGCRP04035 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC25.16■■□□□ 1.62
HMGCRP04035 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC25.16■■□□□ 1.62
HMGCRP04035 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HMGCRP04035 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.15■■□□□ 1.62
HMGCRP04035 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
HMGCRP04035 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
HMGCRP04035 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
HMGCRP04035 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
HMGCRP04035 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
HMGCRP04035 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
HMGCRP04035 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC25.14■■□□□ 1.62
HMGCRP04035 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms