Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC3O95833 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CLIC3O95833 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.45■□□□□ 0.86
CLIC3O95833 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC3O95833 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC3O95833 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC3O95833 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC3O95833 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
CLIC3O95833 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.44■□□□□ 0.86
CLIC3O95833 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC3O95833 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC3O95833 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CLIC3O95833 AC131274.2-201ENST00000580697 1507 ntBASIC20.44■□□□□ 0.86
CLIC3O95833 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
CLIC3O95833 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.44■□□□□ 0.86
CLIC3O95833 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.44■□□□□ 0.86
CLIC3O95833 AL353803.4-201ENST00000565882 1934 ntBASIC20.44■□□□□ 0.86
CLIC3O95833 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CLIC3O95833 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CLIC3O95833 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
CLIC3O95833 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.44■□□□□ 0.86
CLIC3O95833 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
CLIC3O95833 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC3O95833 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC3O95833 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC3O95833 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC3O95833 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC3O95833 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC3O95833 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.43■□□□□ 0.86
CLIC3O95833 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.43■□□□□ 0.86
CLIC3O95833 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC3O95833 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CLIC3O95833 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC3O95833 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.42■□□□□ 0.86
CLIC3O95833 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC3O95833 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC3O95833 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC3O95833 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC3O95833 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CLIC3O95833 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.41■□□□□ 0.86
CLIC3O95833 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC3O95833 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC3O95833 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC3O95833 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC3O95833 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.41■□□□□ 0.86
CLIC3O95833 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC3O95833 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC3O95833 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC3O95833 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC20.41■□□□□ 0.86
CLIC3O95833 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CLIC3O95833 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.41■□□□□ 0.86
CLIC3O95833 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CLIC3O95833 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.4■□□□□ 0.86
CLIC3O95833 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC3O95833 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC3O95833 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CLIC3O95833 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.4■□□□□ 0.86
CLIC3O95833 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.4■□□□□ 0.86
CLIC3O95833 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
CLIC3O95833 MACF1-219ENST00000484793 834 ntTSL 2 BASIC20.4■□□□□ 0.86
CLIC3O95833 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC3O95833 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC3O95833 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CLIC3O95833 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CLIC3O95833 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CLIC3O95833 AL121603.2-201ENST00000557373 2117 ntBASIC20.39■□□□□ 0.86
CLIC3O95833 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC3O95833 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC3O95833 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC3O95833 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC20.39■□□□□ 0.85
CLIC3O95833 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC3O95833 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC3O95833 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
CLIC3O95833 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLIC3O95833 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC3O95833 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC3O95833 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC3O95833 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC3O95833 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.39■□□□□ 0.85
CLIC3O95833 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC3O95833 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC3O95833 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLIC3O95833 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLIC3O95833 AC092667.1-201ENST00000434301 2586 ntBASIC20.39■□□□□ 0.85
CLIC3O95833 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.38■□□□□ 0.85
CLIC3O95833 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
CLIC3O95833 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.38■□□□□ 0.85
CLIC3O95833 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLIC3O95833 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms