Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.66■□□□□ 0.9
SNX4O95219 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SNX4O95219 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX4O95219 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNX4O95219 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SNX4O95219 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX4O95219 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SNX4O95219 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX4O95219 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX4O95219 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX4O95219 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.65■□□□□ 0.9
SNX4O95219 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX4O95219 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX4O95219 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.65■□□□□ 0.9
SNX4O95219 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNX4O95219 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNX4O95219 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNX4O95219 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNX4O95219 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
SNX4O95219 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX4O95219 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.64■□□□□ 0.89
SNX4O95219 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
SNX4O95219 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNX4O95219 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.64■□□□□ 0.89
SNX4O95219 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX4O95219 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SNX4O95219 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNX4O95219 PKD1P6-201ENST00000343738 4769 ntBASIC20.64■□□□□ 0.89
SNX4O95219 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SNX4O95219 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX4O95219 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX4O95219 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX4O95219 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
SNX4O95219 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SNX4O95219 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX4O95219 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNX4O95219 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.63■□□□□ 0.89
SNX4O95219 DUX4L19-201ENST00000557448 1267 ntBASIC20.63■□□□□ 0.89
SNX4O95219 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.63■□□□□ 0.89
SNX4O95219 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX4O95219 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
SNX4O95219 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.63■□□□□ 0.89
SNX4O95219 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX4O95219 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNX4O95219 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX4O95219 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX4O95219 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SNX4O95219 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SNX4O95219 C17orf82-201ENST00000623772 1530 ntBASIC20.63■□□□□ 0.89
SNX4O95219 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.63■□□□□ 0.89
SNX4O95219 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX4O95219 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNX4O95219 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.62■□□□□ 0.89
SNX4O95219 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
SNX4O95219 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.62■□□□□ 0.89
SNX4O95219 AC241377.3-202ENST00000626088 1088 ntBASIC20.62■□□□□ 0.89
SNX4O95219 AC241585.3-202ENST00000628937 1088 ntBASIC20.62■□□□□ 0.89
SNX4O95219 AC245100.8-202ENST00000629247 1058 ntBASIC20.62■□□□□ 0.89
SNX4O95219 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNX4O95219 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.62■□□□□ 0.89
SNX4O95219 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX4O95219 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX4O95219 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SNX4O95219 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SNX4O95219 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX4O95219 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX4O95219 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX4O95219 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX4O95219 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX4O95219 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.61■□□□□ 0.89
SNX4O95219 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.61■□□□□ 0.89
SNX4O95219 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNX4O95219 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNX4O95219 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.61■□□□□ 0.89
SNX4O95219 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.61■□□□□ 0.89
SNX4O95219 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNX4O95219 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX4O95219 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.61■□□□□ 0.89
SNX4O95219 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX4O95219 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SNX4O95219 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.61■□□□□ 0.89
SNX4O95219 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SNX4O95219 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX4O95219 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SNX4O95219 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.6■□□□□ 0.89
SNX4O95219 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SNX4O95219 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX4O95219 AC127496.7-201ENST00000625110 1798 ntBASIC20.6■□□□□ 0.89
SNX4O95219 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX4O95219 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.6■□□□□ 0.89
SNX4O95219 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SNX4O95219 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.6■□□□□ 0.89
SNX4O95219 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX4O95219 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.6■□□□□ 0.89
SNX4O95219 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX4O95219 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.6■□□□□ 0.89
SNX4O95219 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX4O95219 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.6■□□□□ 0.89
SNX4O95219 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX4O95219 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms