Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCNT1O60563 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCNT1O60563 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CCNT1O60563 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.19■■□□□ 1.62
CCNT1O60563 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CCNT1O60563 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.19■■□□□ 1.62
CCNT1O60563 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.19■■□□□ 1.62
CCNT1O60563 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCNT1O60563 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCNT1O60563 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCNT1O60563 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCNT1O60563 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCNT1O60563 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CCNT1O60563 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.18■■□□□ 1.62
CCNT1O60563 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCNT1O60563 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCNT1O60563 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCNT1O60563 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
CCNT1O60563 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCNT1O60563 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.17■■□□□ 1.62
CCNT1O60563 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC25.17■■□□□ 1.62
CCNT1O60563 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC25.17■■□□□ 1.62
CCNT1O60563 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC25.17■■□□□ 1.62
CCNT1O60563 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
CCNT1O60563 AL138724.1-201ENST00000606771 1088 ntBASIC25.17■■□□□ 1.62
CCNT1O60563 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CCNT1O60563 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCNT1O60563 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCNT1O60563 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC25.17■■□□□ 1.62
CCNT1O60563 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC25.16■■□□□ 1.62
CCNT1O60563 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
CCNT1O60563 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC25.16■■□□□ 1.62
CCNT1O60563 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCNT1O60563 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
CCNT1O60563 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.16■■□□□ 1.62
CCNT1O60563 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCNT1O60563 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC25.16■■□□□ 1.62
CCNT1O60563 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCNT1O60563 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCNT1O60563 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
CCNT1O60563 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCNT1O60563 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.16■■□□□ 1.62
CCNT1O60563 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC25.16■■□□□ 1.62
CCNT1O60563 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CCNT1O60563 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCNT1O60563 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
CCNT1O60563 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CCNT1O60563 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCNT1O60563 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCNT1O60563 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC25.15■■□□□ 1.62
CCNT1O60563 AL136162.1-201ENST00000607711 1078 ntBASIC25.15■■□□□ 1.62
CCNT1O60563 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC25.15■■□□□ 1.62
CCNT1O60563 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
CCNT1O60563 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCNT1O60563 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CCNT1O60563 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCNT1O60563 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.14■■□□□ 1.62
CCNT1O60563 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC25.14■■□□□ 1.62
CCNT1O60563 NALT1-201ENST00000429224 738 ntTSL 5 BASIC25.14■■□□□ 1.62
CCNT1O60563 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CCNT1O60563 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.14■■□□□ 1.62
CCNT1O60563 AC011298.3-201ENST00000615796 283 ntBASIC25.14■■□□□ 1.62
CCNT1O60563 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC25.14■■□□□ 1.61
CCNT1O60563 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCNT1O60563 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC25.13■■□□□ 1.61
CCNT1O60563 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CCNT1O60563 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
CCNT1O60563 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC25.13■■□□□ 1.61
CCNT1O60563 AC024257.2-201ENST00000549699 147 ntBASIC25.13■■□□□ 1.61
CCNT1O60563 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.13■■□□□ 1.61
CCNT1O60563 AC110285.6-201ENST00000617652 491 ntBASIC25.13■■□□□ 1.61
CCNT1O60563 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
CCNT1O60563 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.13■■□□□ 1.61
CCNT1O60563 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.13■■□□□ 1.61
CCNT1O60563 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CCNT1O60563 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC25.12■■□□□ 1.61
CCNT1O60563 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CCNT1O60563 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCNT1O60563 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.12■■□□□ 1.61
CCNT1O60563 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC25.12■■□□□ 1.61
CCNT1O60563 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCNT1O60563 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.12■■□□□ 1.61
CCNT1O60563 AC135279.3-201ENST00000610945 1311 ntBASIC25.12■■□□□ 1.61
CCNT1O60563 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
CCNT1O60563 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCNT1O60563 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC25.11■■□□□ 1.61
CCNT1O60563 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.11■■□□□ 1.61
CCNT1O60563 PBX2P1-201ENST00000493219 1291 ntBASIC25.11■■□□□ 1.61
CCNT1O60563 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.11■■□□□ 1.61
CCNT1O60563 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
CCNT1O60563 AC136469.2-201ENST00000623944 1028 ntBASIC25.11■■□□□ 1.61
CCNT1O60563 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC25.11■■□□□ 1.61
CCNT1O60563 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCNT1O60563 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC25.11■■□□□ 1.61
CCNT1O60563 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.11■■□□□ 1.61
CCNT1O60563 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCNT1O60563 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCNT1O60563 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC25.1■■□□□ 1.61
CCNT1O60563 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCNT1O60563 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC25.1■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms