Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SSNA1O43805 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSNA1O43805 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSNA1O43805 CHST11-202ENST00000546689 756 ntTSL 2 BASIC18.85■□□□□ 0.61
SSNA1O43805 CHST11-203ENST00000547956 936 ntTSL 2 BASIC18.85■□□□□ 0.61
SSNA1O43805 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.85■□□□□ 0.61
SSNA1O43805 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
SSNA1O43805 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
SSNA1O43805 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SSNA1O43805 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.85■□□□□ 0.61
SSNA1O43805 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SSNA1O43805 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
SSNA1O43805 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 AC005229.4-201ENST00000610085 2198 ntBASIC18.84■□□□□ 0.61
SSNA1O43805 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SSNA1O43805 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSNA1O43805 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.83■□□□□ 0.61
SSNA1O43805 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.83■□□□□ 0.61
SSNA1O43805 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SSNA1O43805 MED25-210ENST00000612854 801 ntTSL 5 BASIC18.83■□□□□ 0.6
SSNA1O43805 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSNA1O43805 MED25-214ENST00000622402 642 ntTSL 5 BASIC18.83■□□□□ 0.6
SSNA1O43805 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SSNA1O43805 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSNA1O43805 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSNA1O43805 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
SSNA1O43805 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SSNA1O43805 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SSNA1O43805 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
SSNA1O43805 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSNA1O43805 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.82■□□□□ 0.6
SSNA1O43805 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSNA1O43805 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SSNA1O43805 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSNA1O43805 AC126177.7-201ENST00000547904 679 ntBASIC18.82■□□□□ 0.6
SSNA1O43805 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSNA1O43805 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSNA1O43805 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSNA1O43805 FAM99A-202ENST00000538190 1989 ntBASIC18.82■□□□□ 0.6
SSNA1O43805 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SSNA1O43805 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.82■□□□□ 0.6
SSNA1O43805 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSNA1O43805 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSNA1O43805 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSNA1O43805 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSNA1O43805 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSNA1O43805 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
SSNA1O43805 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSNA1O43805 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSNA1O43805 AC079630.1-202ENST00000618127 1840 ntBASIC18.81■□□□□ 0.6
SSNA1O43805 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSNA1O43805 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSNA1O43805 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SSNA1O43805 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SSNA1O43805 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SSNA1O43805 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSNA1O43805 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.8■□□□□ 0.6
SSNA1O43805 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSNA1O43805 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SSNA1O43805 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSNA1O43805 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSNA1O43805 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSNA1O43805 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSNA1O43805 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSNA1O43805 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSNA1O43805 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SSNA1O43805 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSNA1O43805 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SSNA1O43805 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSNA1O43805 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SSNA1O43805 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SSNA1O43805 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSNA1O43805 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSNA1O43805 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SSNA1O43805 AC021231.2-201ENST00000594613 730 ntBASIC18.79■□□□□ 0.6
SSNA1O43805 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.79■□□□□ 0.6
SSNA1O43805 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSNA1O43805 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.79■□□□□ 0.6
SSNA1O43805 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.79■□□□□ 0.6
SSNA1O43805 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSNA1O43805 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.79■□□□□ 0.6
SSNA1O43805 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSNA1O43805 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSNA1O43805 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSNA1O43805 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SSNA1O43805 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.79■□□□□ 0.6
SSNA1O43805 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms