Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH17O14917 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH17O14917 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDH17O14917 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
PCDH17O14917 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PCDH17O14917 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH17O14917 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDH17O14917 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH17O14917 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH17O14917 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH17O14917 AC142381.2-201ENST00000566120 298 ntBASIC21.08■□□□□ 0.97
PCDH17O14917 AC009086.3-201ENST00000623486 1008 ntBASIC21.08■□□□□ 0.97
PCDH17O14917 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH17O14917 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH17O14917 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH17O14917 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDH17O14917 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH17O14917 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH17O14917 SERBP1P1-201ENST00000396021 1160 ntBASIC21.07■□□□□ 0.96
PCDH17O14917 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.07■□□□□ 0.96
PCDH17O14917 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.07■□□□□ 0.96
PCDH17O14917 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH17O14917 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
PCDH17O14917 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH17O14917 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH17O14917 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH17O14917 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
PCDH17O14917 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH17O14917 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH17O14917 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.06■□□□□ 0.96
PCDH17O14917 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH17O14917 SUDS3P1-201ENST00000505831 966 ntBASIC21.06■□□□□ 0.96
PCDH17O14917 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDH17O14917 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
PCDH17O14917 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC21.06■□□□□ 0.96
PCDH17O14917 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
PCDH17O14917 FP325331.1-202ENST00000623531 1380 ntBASIC21.06■□□□□ 0.96
PCDH17O14917 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH17O14917 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH17O14917 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH17O14917 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH17O14917 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH17O14917 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH17O14917 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.05■□□□□ 0.96
PCDH17O14917 EBPL-204ENST00000378272 766 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDH17O14917 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH17O14917 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH17O14917 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH17O14917 AC136469.2-201ENST00000623944 1028 ntBASIC21.05■□□□□ 0.96
PCDH17O14917 AL117328.2-201ENST00000624617 1940 ntBASIC21.05■□□□□ 0.96
PCDH17O14917 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH17O14917 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH17O14917 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH17O14917 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH17O14917 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
PCDH17O14917 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH17O14917 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDH17O14917 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH17O14917 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH17O14917 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH17O14917 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDH17O14917 AL031432.3-201ENST00000607698 485 ntBASIC21.04■□□□□ 0.96
PCDH17O14917 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.04■□□□□ 0.96
PCDH17O14917 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH17O14917 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH17O14917 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDH17O14917 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.04■□□□□ 0.96
PCDH17O14917 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PCDH17O14917 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.04■□□□□ 0.96
PCDH17O14917 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH17O14917 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH17O14917 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.03■□□□□ 0.96
PCDH17O14917 AC233723.2-201ENST00000623798 2106 ntBASIC21.03■□□□□ 0.96
PCDH17O14917 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH17O14917 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH17O14917 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH17O14917 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH17O14917 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH17O14917 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH17O14917 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
PCDH17O14917 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
PCDH17O14917 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PCDH17O14917 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH17O14917 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
PCDH17O14917 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PCDH17O14917 AC091305.1-201ENST00000479476 895 ntBASIC21.02■□□□□ 0.96
PCDH17O14917 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.02■□□□□ 0.96
PCDH17O14917 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH17O14917 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH17O14917 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH17O14917 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH17O14917 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
PCDH17O14917 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH17O14917 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PCDH17O14917 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDH17O14917 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.02■□□□□ 0.96
PCDH17O14917 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH17O14917 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PCDH17O14917 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PCDH17O14917 DUSP8P3-201ENST00000399571 1760 ntBASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms