Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP3D1O14617 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
AP3D1O14617 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
AP3D1O14617 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
AP3D1O14617 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
AP3D1O14617 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3D1O14617 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AP3D1O14617 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3D1O14617 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.61■□□□□ 0.89
AP3D1O14617 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
AP3D1O14617 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.61■□□□□ 0.89
AP3D1O14617 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.61■□□□□ 0.89
AP3D1O14617 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3D1O14617 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
AP3D1O14617 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3D1O14617 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
AP3D1O14617 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.6■□□□□ 0.89
AP3D1O14617 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3D1O14617 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.6■□□□□ 0.89
AP3D1O14617 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
AP3D1O14617 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3D1O14617 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3D1O14617 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3D1O14617 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
AP3D1O14617 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
AP3D1O14617 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3D1O14617 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3D1O14617 TSPY9P-201ENST00000440215 945 ntBASIC20.59■□□□□ 0.89
AP3D1O14617 TSPY11P-201ENST00000442607 1045 ntBASIC20.59■□□□□ 0.89
AP3D1O14617 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
AP3D1O14617 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
AP3D1O14617 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
AP3D1O14617 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
AP3D1O14617 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3D1O14617 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
AP3D1O14617 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
AP3D1O14617 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.58■□□□□ 0.89
AP3D1O14617 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
AP3D1O14617 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.58■□□□□ 0.89
AP3D1O14617 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP3D1O14617 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
AP3D1O14617 MTDHP2-201ENST00000601468 714 ntBASIC20.58■□□□□ 0.89
AP3D1O14617 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
AP3D1O14617 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3D1O14617 EP400NL-214ENST00000641289 2402 ntBASIC20.58■□□□□ 0.88
AP3D1O14617 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3D1O14617 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3D1O14617 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
AP3D1O14617 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3D1O14617 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.57■□□□□ 0.88
AP3D1O14617 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3D1O14617 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP3D1O14617 AC005703.6-201ENST00000623265 1329 ntBASIC20.57■□□□□ 0.88
AP3D1O14617 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
AP3D1O14617 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
AP3D1O14617 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3D1O14617 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
AP3D1O14617 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3D1O14617 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
AP3D1O14617 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3D1O14617 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
AP3D1O14617 AL353803.4-201ENST00000565882 1934 ntBASIC20.57■□□□□ 0.88
AP3D1O14617 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3D1O14617 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3D1O14617 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3D1O14617 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
AP3D1O14617 AL035685.1-201ENST00000636663 812 ntBASIC20.56■□□□□ 0.88
AP3D1O14617 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
AP3D1O14617 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3D1O14617 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
AP3D1O14617 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
AP3D1O14617 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3D1O14617 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
AP3D1O14617 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3D1O14617 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
AP3D1O14617 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
AP3D1O14617 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3D1O14617 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
AP3D1O14617 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3D1O14617 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.55■□□□□ 0.88
AP3D1O14617 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3D1O14617 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
AP3D1O14617 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3D1O14617 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3D1O14617 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.54■□□□□ 0.88
AP3D1O14617 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3D1O14617 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3D1O14617 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.54■□□□□ 0.88
AP3D1O14617 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.54■□□□□ 0.88
AP3D1O14617 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.54■□□□□ 0.88
AP3D1O14617 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.54■□□□□ 0.88
AP3D1O14617 AC010997.5-201ENST00000609182 354 ntBASIC20.54■□□□□ 0.88
AP3D1O14617 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.54■□□□□ 0.88
AP3D1O14617 GUSBP5-202ENST00000510805 1989 ntBASIC20.54■□□□□ 0.88
AP3D1O14617 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
AP3D1O14617 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
AP3D1O14617 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
AP3D1O14617 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.53■□□□□ 0.88
AP3D1O14617 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
AP3D1O14617 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms