Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.13■□□□□ 0.81
NPIPA2E9PIF3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
NPIPA2E9PIF3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.13■□□□□ 0.81
NPIPA2E9PIF3 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.12■□□□□ 0.81
NPIPA2E9PIF3 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.12■□□□□ 0.81
NPIPA2E9PIF3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPA2E9PIF3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPA2E9PIF3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.12■□□□□ 0.81
NPIPA2E9PIF3 MIR6821-201ENST00000617625 74 ntBASIC20.12■□□□□ 0.81
NPIPA2E9PIF3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
NPIPA2E9PIF3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
NPIPA2E9PIF3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPA2E9PIF3 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NPIPA2E9PIF3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.12■□□□□ 0.81
NPIPA2E9PIF3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA2E9PIF3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.11■□□□□ 0.81
NPIPA2E9PIF3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NPIPA2E9PIF3 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA2E9PIF3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA2E9PIF3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA2E9PIF3 SLC47A1P1-202ENST00000449666 945 ntBASIC20.11■□□□□ 0.81
NPIPA2E9PIF3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.11■□□□□ 0.81
NPIPA2E9PIF3 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.11■□□□□ 0.81
NPIPA2E9PIF3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA2E9PIF3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA2E9PIF3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NPIPA2E9PIF3 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NPIPA2E9PIF3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
NPIPA2E9PIF3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 AC097381.1-201ENST00000429019 1296 ntBASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 AC133637.1-201ENST00000624115 1537 ntBASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NPIPA2E9PIF3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 AC087623.3-201ENST00000607047 1098 ntBASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.09■□□□□ 0.81
NPIPA2E9PIF3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPIPA2E9PIF3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.08■□□□□ 0.81
NPIPA2E9PIF3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPIPA2E9PIF3 TSPY26P-201ENST00000476365 1326 ntBASIC20.08■□□□□ 0.81
NPIPA2E9PIF3 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPIPA2E9PIF3 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPIPA2E9PIF3 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPIPA2E9PIF3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NPIPA2E9PIF3 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.08■□□□□ 0.81
NPIPA2E9PIF3 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPIPA2E9PIF3 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPIPA2E9PIF3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NPIPA2E9PIF3 FP325331.1-202ENST00000623531 1380 ntBASIC20.08■□□□□ 0.8
NPIPA2E9PIF3 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.07■□□□□ 0.8
NPIPA2E9PIF3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPA2E9PIF3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPA2E9PIF3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPA2E9PIF3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPA2E9PIF3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.07■□□□□ 0.8
NPIPA2E9PIF3 AC104564.3-201ENST00000582367 638 ntBASIC20.07■□□□□ 0.8
NPIPA2E9PIF3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
NPIPA2E9PIF3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
NPIPA2E9PIF3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPA2E9PIF3 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPA2E9PIF3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.07■□□□□ 0.8
NPIPA2E9PIF3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPA2E9PIF3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPA2E9PIF3 ANOS2P-203ENST00000472227 1816 ntBASIC20.06■□□□□ 0.8
NPIPA2E9PIF3 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NPIPA2E9PIF3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.06■□□□□ 0.8
NPIPA2E9PIF3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPA2E9PIF3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPA2E9PIF3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NPIPA2E9PIF3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
NPIPA2E9PIF3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.06■□□□□ 0.8
NPIPA2E9PIF3 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.06■□□□□ 0.8
NPIPA2E9PIF3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPA2E9PIF3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms