Protein–RNA interactions for Protein: A6NKN8

PCP4L1, Purkinje cell protein 4-like protein 1, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4L1A6NKN8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCP4L1A6NKN8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCP4L1A6NKN8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCP4L1A6NKN8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCP4L1A6NKN8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCP4L1A6NKN8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCP4L1A6NKN8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC17.5■□□□□ 0.39
PCP4L1A6NKN8 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCP4L1A6NKN8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCP4L1A6NKN8 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCP4L1A6NKN8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCP4L1A6NKN8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCP4L1A6NKN8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCP4L1A6NKN8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCP4L1A6NKN8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCP4L1A6NKN8 BID-212ENST00000614949 1988 ntTSL 5 BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCP4L1A6NKN8 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 AC010501.1-201ENST00000606270 1962 ntBASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCP4L1A6NKN8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCP4L1A6NKN8 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.47■□□□□ 0.39
PCP4L1A6NKN8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCP4L1A6NKN8 LINC01521-201ENST00000504184 1943 ntBASIC17.47■□□□□ 0.39
PCP4L1A6NKN8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PCP4L1A6NKN8 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCP4L1A6NKN8 AP003733.4-201ENST00000623785 1697 ntBASIC17.47■□□□□ 0.39
PCP4L1A6NKN8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PCP4L1A6NKN8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.47■□□□□ 0.39
PCP4L1A6NKN8 AC004812.2-201ENST00000611079 2094 ntBASIC17.47■□□□□ 0.39
PCP4L1A6NKN8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.47■□□□□ 0.39
PCP4L1A6NKN8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCP4L1A6NKN8 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCP4L1A6NKN8 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCP4L1A6NKN8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.46■□□□□ 0.39
PCP4L1A6NKN8 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCP4L1A6NKN8 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.46■□□□□ 0.39
PCP4L1A6NKN8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCP4L1A6NKN8 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCP4L1A6NKN8 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCP4L1A6NKN8 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC17.46■□□□□ 0.39
PCP4L1A6NKN8 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCP4L1A6NKN8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCP4L1A6NKN8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCP4L1A6NKN8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.46■□□□□ 0.39
PCP4L1A6NKN8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.46■□□□□ 0.38
PCP4L1A6NKN8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PCP4L1A6NKN8 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCP4L1A6NKN8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCP4L1A6NKN8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCP4L1A6NKN8 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCP4L1A6NKN8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCP4L1A6NKN8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCP4L1A6NKN8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCP4L1A6NKN8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
PCP4L1A6NKN8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.45■□□□□ 0.38
PCP4L1A6NKN8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
PCP4L1A6NKN8 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCP4L1A6NKN8 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCP4L1A6NKN8 AC141586.4-201ENST00000624558 1573 ntBASIC17.45■□□□□ 0.38
PCP4L1A6NKN8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCP4L1A6NKN8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCP4L1A6NKN8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCP4L1A6NKN8 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCP4L1A6NKN8 FBXW4P1-201ENST00000426721 2239 ntBASIC17.44■□□□□ 0.38
PCP4L1A6NKN8 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCP4L1A6NKN8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.44■□□□□ 0.38
PCP4L1A6NKN8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCP4L1A6NKN8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.44■□□□□ 0.38
PCP4L1A6NKN8 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCP4L1A6NKN8 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCP4L1A6NKN8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms