Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
HFM1A2PYH4 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC33.08■■■□□ 2.89
HFM1A2PYH4 RHOF-204ENST00000537265 699 ntTSL 2 BASIC33.08■■■□□ 2.89
HFM1A2PYH4 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC33.08■■■□□ 2.89
HFM1A2PYH4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC33.08■■■□□ 2.89
HFM1A2PYH4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.89
HFM1A2PYH4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC33.07■■■□□ 2.88
HFM1A2PYH4 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
HFM1A2PYH4 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
HFM1A2PYH4 GRAMD4P2-201ENST00000423297 1097 ntBASIC33.07■■■□□ 2.88
HFM1A2PYH4 LGR4-203ENST00000480977 492 ntTSL 2 BASIC33.07■■■□□ 2.88
HFM1A2PYH4 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC33.07■■■□□ 2.88
HFM1A2PYH4 AL031602.1-201ENST00000633169 911 ntBASIC33.07■■■□□ 2.88
HFM1A2PYH4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC33.07■■■□□ 2.88
HFM1A2PYH4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
HFM1A2PYH4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC33.06■■■□□ 2.88
HFM1A2PYH4 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC33.06■■■□□ 2.88
HFM1A2PYH4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
HFM1A2PYH4 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
HFM1A2PYH4 RBM38-205ENST00000440234 686 ntTSL 2 BASIC33.06■■■□□ 2.88
HFM1A2PYH4 AICDA-202ENST00000537228 667 ntTSL 5 BASIC33.06■■■□□ 2.88
HFM1A2PYH4 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC33.06■■■□□ 2.88
HFM1A2PYH4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC33.06■■■□□ 2.88
HFM1A2PYH4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC33.06■■■□□ 2.88
HFM1A2PYH4 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
HFM1A2PYH4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC33.06■■■□□ 2.88
HFM1A2PYH4 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
HFM1A2PYH4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
HFM1A2PYH4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC33.05■■■□□ 2.88
HFM1A2PYH4 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC33.05■■■□□ 2.88
HFM1A2PYH4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
HFM1A2PYH4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC33.04■■■□□ 2.88
HFM1A2PYH4 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
HFM1A2PYH4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC33.04■■■□□ 2.88
HFM1A2PYH4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC33.04■■■□□ 2.88
HFM1A2PYH4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC33.04■■■□□ 2.88
HFM1A2PYH4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
HFM1A2PYH4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
HFM1A2PYH4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
HFM1A2PYH4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC33.04■■■□□ 2.88
HFM1A2PYH4 TSPY26P-201ENST00000476365 1326 ntBASIC33.04■■■□□ 2.88
HFM1A2PYH4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
HFM1A2PYH4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC33.03■■■□□ 2.88
HFM1A2PYH4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC33.03■■■□□ 2.88
HFM1A2PYH4 AC026271.2-201ENST00000428091 497 ntBASIC33.03■■■□□ 2.88
HFM1A2PYH4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
HFM1A2PYH4 AP005435.1-201ENST00000529293 1178 ntBASIC33.03■■■□□ 2.88
HFM1A2PYH4 AC126544.1-201ENST00000580842 1059 ntBASIC33.03■■■□□ 2.88
HFM1A2PYH4 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
HFM1A2PYH4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC33.03■■■□□ 2.88
HFM1A2PYH4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC33.03■■■□□ 2.88
HFM1A2PYH4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC33.03■■■□□ 2.88
HFM1A2PYH4 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC33.03■■■□□ 2.88
HFM1A2PYH4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC33.03■■■□□ 2.88
HFM1A2PYH4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
HFM1A2PYH4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC33.02■■■□□ 2.88
HFM1A2PYH4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
HFM1A2PYH4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
HFM1A2PYH4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
HFM1A2PYH4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC33.02■■■□□ 2.88
HFM1A2PYH4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
HFM1A2PYH4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC33.01■■■□□ 2.87
HFM1A2PYH4 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC33.01■■■□□ 2.87
HFM1A2PYH4 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC33.01■■■□□ 2.87
HFM1A2PYH4 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC33.01■■■□□ 2.87
HFM1A2PYH4 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC33■■■□□ 2.87
HFM1A2PYH4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC33■■■□□ 2.87
HFM1A2PYH4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC33■■■□□ 2.87
HFM1A2PYH4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
HFM1A2PYH4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC33■■■□□ 2.87
HFM1A2PYH4 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC33■■■□□ 2.87
HFM1A2PYH4 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
HFM1A2PYH4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC32.99■■■□□ 2.87
HFM1A2PYH4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC32.99■■■□□ 2.87
HFM1A2PYH4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC32.99■■■□□ 2.87
HFM1A2PYH4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC32.99■■■□□ 2.87
HFM1A2PYH4 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC32.99■■■□□ 2.87
HFM1A2PYH4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC32.99■■■□□ 2.87
HFM1A2PYH4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC32.98■■■□□ 2.87
HFM1A2PYH4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
HFM1A2PYH4 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
HFM1A2PYH4 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC32.98■■■□□ 2.87
HFM1A2PYH4 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC32.98■■■□□ 2.87
HFM1A2PYH4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC32.98■■■□□ 2.87
HFM1A2PYH4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
HFM1A2PYH4 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC32.98■■■□□ 2.87
HFM1A2PYH4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC32.98■■■□□ 2.87
HFM1A2PYH4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
HFM1A2PYH4 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC32.97■■■□□ 2.87
HFM1A2PYH4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC32.97■■■□□ 2.87
HFM1A2PYH4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
HFM1A2PYH4 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC32.96■■■□□ 2.87
HFM1A2PYH4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC32.96■■■□□ 2.87
HFM1A2PYH4 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC32.96■■■□□ 2.87
HFM1A2PYH4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
HFM1A2PYH4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
HFM1A2PYH4 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC32.96■■■□□ 2.87
HFM1A2PYH4 IRS3P-201ENST00000223076 1006 ntBASIC32.95■■■□□ 2.87
HFM1A2PYH4 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
HFM1A2PYH4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC32.95■■■□□ 2.87
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms