Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 TFPT-201ENST00000391757 774 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 TSPY9P-201ENST00000440215 945 ntBASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 TSPY11P-201ENST00000442607 1045 ntBASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRAV4A0A0B4J268 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 FP325331.1-202ENST00000623531 1380 ntBASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC15.89■□□□□ 0.13
TRAV4A0A0B4J268 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 LINC01529-204ENST00000636474 1715 ntBASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 GALC-202ENST00000393568 2054 ntTSL 2 BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TRAV4A0A0B4J268 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV4A0A0B4J268 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV4A0A0B4J268 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV4A0A0B4J268 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV4A0A0B4J268 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV4A0A0B4J268 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV4A0A0B4J268 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV4A0A0B4J268 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV4A0A0B4J268 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV4A0A0B4J268 PKD1P6-201ENST00000343738 4769 ntBASIC15.87■□□□□ 0.13
TRAV4A0A0B4J268 C1orf229-201ENST00000623686 2258 ntBASIC15.87■□□□□ 0.13
TRAV4A0A0B4J268 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV4A0A0B4J268 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV4A0A0B4J268 AC233723.2-201ENST00000623798 2106 ntBASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 ESRRAP2-201ENST00000418437 1549 ntBASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 HES6-204ENST00000409182 863 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV4A0A0B4J268 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV4A0A0B4J268 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV4A0A0B4J268 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV4A0A0B4J268 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV4A0A0B4J268 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
TRAV4A0A0B4J268 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV4A0A0B4J268 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC15.85■□□□□ 0.13
TRAV4A0A0B4J268 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
TRAV4A0A0B4J268 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV4A0A0B4J268 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV4A0A0B4J268 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV4A0A0B4J268 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV4A0A0B4J268 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRAV4A0A0B4J268 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
TRAV4A0A0B4J268 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV4A0A0B4J268 LSM4-201ENST00000252816 986 ntTSL 2 BASIC15.84■□□□□ 0.13
TRAV4A0A0B4J268 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV4A0A0B4J268 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.84■□□□□ 0.13
TRAV4A0A0B4J268 MIR6724-1-201ENST00000616420 92 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms